RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 TSGA10IPQ3SY00 556 aa28.06■■■□□ 2.08
CCND3-202ENST00000372988 SLU7O95391 586 aaKnown RBP28.05■■■□□ 2.08
CCND3-202ENST00000372988 CTAGE5O15320 804 aa28.04■■■□□ 2.08
CCND3-202ENST00000372988 BCL11BQ9C0K0 894 aaPredicted RBP28.04■■■□□ 2.08
CCND3-202ENST00000372988 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
CCND3-202ENST00000372988 MED23Q9ULK4 1368 aa28.04■■■□□ 2.08
CCND3-202ENST00000372988 A0A0D9SFI3 127 aa28.04■■■□□ 2.08
CCND3-202ENST00000372988 AACSQ86V21 672 aa28.04■■■□□ 2.08
CCND3-202ENST00000372988 JAK2O60674 1132 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 STK3Q13188 491 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 DHX40Q8IX18 779 aaKnown RBP28.03■■■□□ 2.08
CCND3-202ENST00000372988 GTF3C6Q969F1 213 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 CHPF2Q9P2E5 772 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 EIF2S2P20042 333 aaKnown RBP28.03■■■□□ 2.08
CCND3-202ENST00000372988 BRF1Q92994 677 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 ZSCAN16Q9H4T2 348 aaPredicted RBP28.03■■■□□ 2.08
CCND3-202ENST00000372988 ZNF446Q9NWS9 450 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 CFAP45Q9UL16 551 aa28.03■■■□□ 2.08
CCND3-202ENST00000372988 KIF2AO00139 706 aaPredicted RBP28.02■■■□□ 2.08
CCND3-202ENST00000372988 HOXB7P09629 217 aa28.02■■■□□ 2.08
CCND3-202ENST00000372988 HMG20BQ9P0W2 317 aa28.02■■■□□ 2.08
CCND3-202ENST00000372988 PA2G4Q9UQ80 394 aaKnown RBP28.02■■■□□ 2.08
CCND3-202ENST00000372988 TRMT1Q9NXH9 659 aaKnown RBP28.01■■■□□ 2.08
CCND3-202ENST00000372988 EIF4A1P60842 406 aaKnown RBP28.01■■■□□ 2.07
CCND3-202ENST00000372988 CREBRFQ8IUR6 639 aa28.01■■■□□ 2.07
CCND3-202ENST00000372988 ADD1P35611 737 aaKnown RBP28■■■□□ 2.07
CCND3-202ENST00000372988 FILIP1Q7Z7B0 1213 aa28■■■□□ 2.07
CCND3-202ENST00000372988 L2HGDHQ9H9P8 463 aa28■■■□□ 2.07
CCND3-202ENST00000372988 CEMIPQ8WUJ3 1361 aa27.99■■■□□ 2.07
CCND3-202ENST00000372988 H2AFXP16104 143 aaPredicted RBP27.99■■■□□ 2.07
CCND3-202ENST00000372988 HDGFP51858 240 aaKnown RBP27.98■■■□□ 2.07
CCND3-202ENST00000372988 GOLPH3LQ9H4A5 285 aa27.98■■■□□ 2.07
CCND3-202ENST00000372988 MED1Q15648 1581 aaPredicted RBP27.98■■■□□ 2.07
CCND3-202ENST00000372988 BECN2A8MW95 431 aa27.98■■■□□ 2.07
CCND3-202ENST00000372988 SNW1Q13573 536 aaKnown RBP27.98■■■□□ 2.07
CCND3-202ENST00000372988 CCAR1Q8IX12 1150 aaKnown RBP27.98■■■□□ 2.07
CCND3-202ENST00000372988 DDX11Q96FC9 970 aa27.98■■■□□ 2.07
CCND3-202ENST00000372988 RCOR1Q9UKL0 485 aa27.98■■■□□ 2.07
CCND3-202ENST00000372988 GSDMDP57764 484 aa27.97■■■□□ 2.07
CCND3-202ENST00000372988 EAF2Q96CJ1 260 aaPredicted RBP27.97■■■□□ 2.07
CCND3-202ENST00000372988 OSBPL5Q9H0X9 879 aaPredicted RBP27.97■■■□□ 2.07
CCND3-202ENST00000372988 ST7Q9NRC1 585 aa27.97■■■□□ 2.07
CCND3-202ENST00000372988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.97■■■□□ 2.07
CCND3-202ENST00000372988 USPL1Q5W0Q7 1092 aa27.97■■■□□ 2.07
CCND3-202ENST00000372988 TIGD1Q96MW7 591 aa27.97■■■□□ 2.07
CCND3-202ENST00000372988 ANO10Q9NW15 660 aa27.97■■■□□ 2.07
CCND3-202ENST00000372988 PIK3C2AO00443 1686 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 H3BQV1 296 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 SASH1O94885 1247 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 HOXC9P31274 260 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 IFFO2Q5TF58 517 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 ZNF589Q86UQ0 364 aaPredicted RBP27.96■■■□□ 2.07
CCND3-202ENST00000372988 ADAMTS13Q76LX8 1427 aa27.96■■■□□ 2.07
CCND3-202ENST00000372988 ZBTB22O15209 634 aa27.95■■■□□ 2.07
CCND3-202ENST00000372988 ALDH1L1O75891 902 aa27.95■■■□□ 2.07
CCND3-202ENST00000372988 NBPF11Q86T75 865 aa27.95■■■□□ 2.07
CCND3-202ENST00000372988 IRX5P78411 483 aaPredicted RBP27.95■■■□□ 2.06
CCND3-202ENST00000372988 BMS1Q14692 1282 aaKnown RBP27.95■■■□□ 2.06
CCND3-202ENST00000372988 ENGASEQ8NFI3 743 aa27.95■■■□□ 2.06
CCND3-202ENST00000372988 FSD1Q9BTV5 496 aa27.95■■■□□ 2.06
CCND3-202ENST00000372988 CHMP4AQ9BY43 222 aa27.95■■■□□ 2.06
CCND3-202ENST00000372988 KDM3BQ7LBC6 1761 aa27.95■■■□□ 2.06
CCND3-202ENST00000372988 KRT32Q14532 448 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 IMPACTQ9P2X3 320 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 MYH15Q9Y2K3 1946 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 TAF5LO75529 589 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 SMARCC2Q8TAQ2 1214 aa27.94■■■□□ 2.06
CCND3-202ENST00000372988 ANXA1P04083 346 aa27.93■■■□□ 2.06
CCND3-202ENST00000372988 E4F1Q66K89 784 aaPredicted RBP27.93■■■□□ 2.06
CCND3-202ENST00000372988 CCDC8Q9H0W5 538 aaPredicted RBP27.93■■■□□ 2.06
CCND3-202ENST00000372988 TLR7Q9NYK1 1049 aaKnown RBP27.93■■■□□ 2.06
CCND3-202ENST00000372988 C9orf78Q9NZ63 289 aaPredicted RBP27.93■■■□□ 2.06
CCND3-202ENST00000372988 CALCOCO1Q9P1Z2 691 aa27.93■■■□□ 2.06
CCND3-202ENST00000372988 FHOD1Q9Y613 1164 aa27.92■■■□□ 2.06
CCND3-202ENST00000372988 CEBPZQ03701 1054 aaKnown RBP27.92■■■□□ 2.06
CCND3-202ENST00000372988 BOLA2Q9H3K6 86 aa27.92■■■□□ 2.06
CCND3-202ENST00000372988 A0A087WWV3 80 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 CCDC73Q6ZRK6 1079 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 CEP57L1Q8IYX8 460 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 AOPEPQ8N6M6 819 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 PPP1R13BQ96KQ4 1090 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 FAM160A1Q05DH4 1040 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 ERCC6LQ2NKX8 1250 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 NAA16Q6N069 864 aaPredicted RBP27.91■■■□□ 2.06
CCND3-202ENST00000372988 NEK1Q96PY6 1258 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 HDAC5Q9UQL6 1122 aa27.91■■■□□ 2.06
CCND3-202ENST00000372988 KINO60870 393 aaKnown RBP27.9■■■□□ 2.06
CCND3-202ENST00000372988 CYP2C19P33261 490 aa27.9■■■□□ 2.06
CCND3-202ENST00000372988 KCNJ6P48051 423 aa27.9■■■□□ 2.06
CCND3-202ENST00000372988 Q6ZUG5 572 aa27.9■■■□□ 2.06
CCND3-202ENST00000372988 NOL10Q9BSC4 688 aaKnown RBP27.9■■■□□ 2.06
CCND3-202ENST00000372988 FTOQ9C0B1 505 aaKnown RBP eCLIP27.9■■■□□ 2.06
CCND3-202ENST00000372988 ERICH4A6NGS2 130 aa27.89■■■□□ 2.06
CCND3-202ENST00000372988 NUTM2GQ5VZR2 741 aa27.89■■■□□ 2.06
CCND3-202ENST00000372988 LLPHQ9BRT6 129 aaKnown RBP27.89■■■□□ 2.06
CCND3-202ENST00000372988 COL15A1P39059 1388 aa27.89■■■□□ 2.06
CCND3-202ENST00000372988 DIP2BQ9P265 1576 aa27.89■■■□□ 2.06
CCND3-202ENST00000372988 PSDA5PKW4 1024 aaPredicted RBP27.89■■■□□ 2.05
CCND3-202ENST00000372988 KCNQ3O43525 872 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms