RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 RREB1Q92766 1687 aa28.58■■■□□ 2.17
SNX21-204ENST00000372542 DZIP3Q86Y13 1208 aaKnown RBP28.57■■■□□ 2.16
SNX21-204ENST00000372542 MAP4K1Q92918 833 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 TM6SF1Q9BZW5 370 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 CYP2E1P05181 493 aaPredicted RBP28.57■■■□□ 2.16
SNX21-204ENST00000372542 SSFA2P28290 1259 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 LRRC24Q50LG9 513 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 RASEFQ8IZ41 740 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 ZNF594Q96JF6 807 aaPredicted RBP28.57■■■□□ 2.16
SNX21-204ENST00000372542 CEP126Q9P2H0 1117 aa28.57■■■□□ 2.16
SNX21-204ENST00000372542 NECTIN1Q15223 517 aa28.56■■■□□ 2.16
SNX21-204ENST00000372542 A0A0D9SFI3 127 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 IFIT5Q13325 482 aaKnown RBP28.55■■■□□ 2.16
SNX21-204ENST00000372542 ZGPATQ8N5A5 531 aaKnown RBP28.55■■■□□ 2.16
SNX21-204ENST00000372542 SMARCC1Q92922 1105 aaPredicted RBP28.55■■■□□ 2.16
SNX21-204ENST00000372542 NEUROD6Q96NK8 337 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 CCDC87Q9NVE4 849 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 AKAP2Q9Y2D5 859 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 MYH3P11055 1940 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 JCADQ9P266 1359 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 ZKSCAN1P17029 563 aaPredicted RBP28.55■■■□□ 2.16
SNX21-204ENST00000372542 EIF5P55010 431 aaKnown RBP28.55■■■□□ 2.16
SNX21-204ENST00000372542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.55■■■□□ 2.16
SNX21-204ENST00000372542 TTC14Q96N46 770 aa28.55■■■□□ 2.16
SNX21-204ENST00000372542 SPEF2Q9C093 1822 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 UBAP1LF5GYI3 381 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 TRAK2O60296 914 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 GPTP24298 496 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 TAF7LQ5H9L4 462 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 ACSBG1Q96GR2 724 aa28.54■■■□□ 2.16
SNX21-204ENST00000372542 RBM8AQ9Y5S9 174 aaKnown RBP28.54■■■□□ 2.16
SNX21-204ENST00000372542 LOC102724428A0A0B4J2F2 783 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 GOLGA6L22H0YM25 854 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 SIK1P57059 783 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 PRPF40BQ6NWY9 871 aaKnown RBP28.53■■■□□ 2.16
SNX21-204ENST00000372542 ATP6V1AP38606 617 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 KCNJ4P48050 445 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 RNF20Q5VTR2 975 aa28.53■■■□□ 2.16
SNX21-204ENST00000372542 DNAJC2Q99543 621 aaKnown RBP28.53■■■□□ 2.16
SNX21-204ENST00000372542 PALLDQ8WX93 1383 aa28.52■■■□□ 2.16
SNX21-204ENST00000372542 A0A1B0GUL7 405 aa28.52■■■□□ 2.16
SNX21-204ENST00000372542 VPS72Q15906 364 aa28.52■■■□□ 2.16
SNX21-204ENST00000372542 INTS5Q6P9B9 1019 aaKnown RBP28.52■■■□□ 2.16
SNX21-204ENST00000372542 ZNF34Q8IZ26 560 aa28.52■■■□□ 2.16
SNX21-204ENST00000372542 KBTBD3Q8NAB2 608 aa28.52■■■□□ 2.16
SNX21-204ENST00000372542 PUS3Q9BZE2 481 aaKnown RBP28.52■■■□□ 2.16
SNX21-204ENST00000372542 TIMM10P62072 90 aa28.51■■■□□ 2.15
SNX21-204ENST00000372542 SKOR2Q2VWA4 1001 aaPredicted RBP28.51■■■□□ 2.15
SNX21-204ENST00000372542 EDC3Q96F86 508 aaKnown RBP28.51■■■□□ 2.15
SNX21-204ENST00000372542 TRMT112Q9UI30 125 aaKnown RBP28.51■■■□□ 2.15
SNX21-204ENST00000372542 A0A0G2JS52 829 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 CTSWP56202 376 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 ZNF831Q5JPB2 1677 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 CREB3L3Q68CJ9 461 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 AK7Q96M32 723 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 TBC1D2BQ9UPU7 963 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 IRS4O14654 1257 aaPredicted RBP28.5■■■□□ 2.15
SNX21-204ENST00000372542 CRKLP46109 303 aaKnown RBP28.5■■■□□ 2.15
SNX21-204ENST00000372542 TTLL11Q8NHH1 800 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 ZSWIM6Q9HCJ5 1215 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 HMG20BQ9P0W2 317 aa28.5■■■□□ 2.15
SNX21-204ENST00000372542 PDE8AO60658 829 aa28.49■■■□□ 2.15
SNX21-204ENST00000372542 CASTP20810 708 aaKnown RBP28.49■■■□□ 2.15
SNX21-204ENST00000372542 VPS53Q5VIR6 699 aa28.49■■■□□ 2.15
SNX21-204ENST00000372542 PAG1Q9NWQ8 432 aa28.49■■■□□ 2.15
SNX21-204ENST00000372542 BAG4O95429 457 aaKnown RBP28.48■■■□□ 2.15
SNX21-204ENST00000372542 PSMA5P28066 241 aa28.48■■■□□ 2.15
SNX21-204ENST00000372542 JAKMIP1Q96N16 626 aaKnown RBP28.48■■■□□ 2.15
SNX21-204ENST00000372542 CYP46A1Q9Y6A2 500 aa28.48■■■□□ 2.15
SNX21-204ENST00000372542 ANKRD18BA2A2Z9 1011 aa28.48■■■□□ 2.15
SNX21-204ENST00000372542 LIMCH1Q9UPQ0 1083 aa28.48■■■□□ 2.15
SNX21-204ENST00000372542 SH3TC1Q8TE82 1336 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 SLC27A2O14975 620 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 TAF5LO75529 589 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 AK2P54819 239 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 NOL8Q76FK4 1167 aaKnown RBP28.47■■■□□ 2.15
SNX21-204ENST00000372542 NGLY1Q96IV0 654 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 BCL9LQ86UU0 1499 aa28.47■■■□□ 2.15
SNX21-204ENST00000372542 IFIT1P09914 478 aaKnown RBP28.46■■■□□ 2.15
SNX21-204ENST00000372542 MCMDC2Q4G0Z9 681 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 CCDC158Q5M9N0 1113 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 UBN2Q6ZU65 1347 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 ITGA6P23229 1130 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 TSGA10IPQ3SY00 556 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 USPL1Q5W0Q7 1092 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 DDX46Q7L014 1031 aaKnown RBP28.46■■■□□ 2.15
SNX21-204ENST00000372542 ZNF589Q86UQ0 364 aaPredicted RBP28.46■■■□□ 2.15
SNX21-204ENST00000372542 PDRG1Q9NUG6 133 aa28.46■■■□□ 2.15
SNX21-204ENST00000372542 RPAP1Q9BWH6 1393 aaPredicted RBP28.45■■■□□ 2.15
SNX21-204ENST00000372542 RUFY3Q7L099 469 aa28.45■■■□□ 2.14
SNX21-204ENST00000372542 C8orf37Q96NL8 207 aa28.45■■■□□ 2.14
SNX21-204ENST00000372542 HELLSQ9NRZ9 838 aa28.45■■■□□ 2.14
SNX21-204ENST00000372542 ITPK1Q13572 414 aa28.44■■■□□ 2.14
SNX21-204ENST00000372542 FAM98CQ17RN3 349 aaKnown RBP28.44■■■□□ 2.14
SNX21-204ENST00000372542 PARP10Q53GL7 1025 aa28.44■■■□□ 2.14
SNX21-204ENST00000372542 SYNE4Q8N205 404 aa28.44■■■□□ 2.14
SNX21-204ENST00000372542 ZSCAN31Q96LW9 406 aaPredicted RBP28.44■■■□□ 2.14
SNX21-204ENST00000372542 GREM2Q9H772 168 aa28.44■■■□□ 2.14
SNX21-204ENST00000372542 ABCC12Q96J65 1359 aa28.44■■■□□ 2.14
SNX21-204ENST00000372542 COL5A3P25940 1745 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms