RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 COL16A1Q07092 1604 aaPredicted RBP15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 EYA2O00167 538 aa15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 SLC27A2O14975 620 aa15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 PRPF40AO75400 957 aaKnown RBP15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 BCL9O00512 1426 aa15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
TSC22D3-206ENST00000372397 VPS53Q5VIR6 699 aa15.27■□□□□ 0.04
TSC22D3-206ENST00000372397 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
TSC22D3-206ENST00000372397 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
TSC22D3-206ENST00000372397 GPR108Q9NPR9 543 aa15.27■□□□□ 0.04
TSC22D3-206ENST00000372397 AHDC1Q5TGY3 1603 aaPredicted RBP15.27■□□□□ 0.04
TSC22D3-206ENST00000372397 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.03
TSC22D3-206ENST00000372397 FAM89AQ96GI7 184 aa15.27■□□□□ 0.03
TSC22D3-206ENST00000372397 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.03
TSC22D3-206ENST00000372397 TAF5LO75529 589 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 CIAO1O76071 339 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 CHGBP05060 677 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 CYP19A1P11511 503 aaPredicted RBP15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 MRE11P49959 708 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 LARGE1O95461 756 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 HLFQ16534 295 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
TSC22D3-206ENST00000372397 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 GIGYF2Q6Y7W6 1299 aaKnown RBP15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 CCDC85AQ96PX6 553 aaPredicted RBP15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 GRPEL1Q9HAV7 217 aa15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 ISY1Q9ULR0 285 aaKnown RBP15.25■□□□□ 0.03
TSC22D3-206ENST00000372397 JCADQ9P266 1359 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 ADAMTS2O95450 1211 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 KBTBD3Q8NAB2 608 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 ZNF609O15014 1411 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 A0A1B0GUL7 405 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 GOLIM4O00461 696 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 GPTP24298 496 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 PSMA5P28066 241 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 ZSCAN31Q96LW9 406 aaPredicted RBP15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 LRP6O75581 1613 aa15.24■□□□□ 0.03
TSC22D3-206ENST00000372397 WNK3Q9BYP7 1800 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 PLA2G12BQ9BX93 195 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
TSC22D3-206ENST00000372397 CSF1RP07333 972 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 NLRP10Q86W26 655 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
TSC22D3-206ENST00000372397 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 IFIT5Q13325 482 aaKnown RBP15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 ME3Q16798 604 aa15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 HSP90AB3PQ58FF7 597 aa15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 UBE2Q2Q8WVN8 375 aa15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 TPCN1Q9ULQ1 816 aa15.21■□□□□ 0.03
TSC22D3-206ENST00000372397 DTNBO60941 627 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 SYT1P21579 422 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 RPS6KB1P23443 525 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 TCEANC2Q96MN5 208 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 FBXO3Q9UK99 471 aa15.21■□□□□ 0.02
TSC22D3-206ENST00000372397 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 NUP98P52948 1817 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 SPATA31A1Q5TZJ5 1347 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 CDHR2Q9BYE9 1310 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 TCHHQ07283 1943 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 NECAB1Q8N987 351 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 CDCA7Q9BWT1 371 aaPredicted RBP15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
TSC22D3-206ENST00000372397 ANKRD36CQ5JPF3 1778 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms