RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TFCP2Q12800 502 aa21.58■■□□□ 1.05
CD40-201ENST00000372276 FAM227BQ96M60 508 aa21.58■■□□□ 1.05
CD40-201ENST00000372276 RRAGDQ9NQL2 400 aaPredicted RBP21.58■■□□□ 1.05
CD40-201ENST00000372276 CIAO1O76071 339 aa21.58■■□□□ 1.04
CD40-201ENST00000372276 F13A1P00488 732 aa21.58■■□□□ 1.04
CD40-201ENST00000372276 TLR7Q9NYK1 1049 aaKnown RBP21.58■■□□□ 1.04
CD40-201ENST00000372276 TMEM63CQ9P1W3 806 aa21.58■■□□□ 1.04
CD40-201ENST00000372276 DBNLQ9UJU6 430 aaKnown RBP21.58■■□□□ 1.04
CD40-201ENST00000372276 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
CD40-201ENST00000372276 TNS2Q63HR2 1409 aa21.57■■□□□ 1.04
CD40-201ENST00000372276 LRRFIP1Q32MZ4 808 aaKnown RBP21.57■■□□□ 1.04
CD40-201ENST00000372276 FAM184AQ8NB25 1140 aa21.57■■□□□ 1.04
CD40-201ENST00000372276 CHMP4CQ96CF2 233 aa21.57■■□□□ 1.04
CD40-201ENST00000372276 NUP188Q5SRE5 1749 aa21.57■■□□□ 1.04
CD40-201ENST00000372276 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 UBE2HP62256 183 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 FOXO4P98177 505 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 FOXD4L5Q5VV16 416 aaPredicted RBP21.56■■□□□ 1.04
CD40-201ENST00000372276 LMBR1LQ6UX01 489 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 USP48Q86UV5 1035 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 VSIG10Q8N0Z9 540 aa21.56■■□□□ 1.04
CD40-201ENST00000372276 FOXD4L4Q8WXT5 416 aaPredicted RBP21.56■■□□□ 1.04
CD40-201ENST00000372276 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
CD40-201ENST00000372276 A0A0D9SFI3 127 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 ATP5J2-PTCD1G3V325 749 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 PTCD1O75127 700 aaKnown RBP21.55■■□□□ 1.04
CD40-201ENST00000372276 TAF5LO75529 589 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 RPS6KB1P23443 525 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 PRIM1P49642 420 aaKnown RBP21.55■■□□□ 1.04
CD40-201ENST00000372276 ADCK5Q3MIX3 580 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 MCMDC2Q4G0Z9 681 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 NBPF14Q5TI25 921 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
CD40-201ENST00000372276 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.55■■□□□ 1.04
CD40-201ENST00000372276 HMGB1P09429 215 aaKnown RBP21.55■■□□□ 1.04
CD40-201ENST00000372276 GJB2P29033 226 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 TRIM28Q13263 835 aaKnown RBP21.55■■□□□ 1.04
CD40-201ENST00000372276 KLHDC4Q8TBB5 520 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 HELLSQ9NRZ9 838 aa21.55■■□□□ 1.04
CD40-201ENST00000372276 EVA1CP58658 441 aa21.54■■□□□ 1.04
CD40-201ENST00000372276 CCDC83Q8IWF9 413 aa21.54■■□□□ 1.04
CD40-201ENST00000372276 TSPY26PQ9H489 355 aa21.54■■□□□ 1.04
CD40-201ENST00000372276 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
CD40-201ENST00000372276 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
CD40-201ENST00000372276 SH3TC1Q8TE82 1336 aa21.53■■□□□ 1.04
CD40-201ENST00000372276 UVSSAQ2YD98 709 aa21.53■■□□□ 1.04
CD40-201ENST00000372276 CCDC183Q5T5S1 534 aa21.53■■□□□ 1.04
CD40-201ENST00000372276 KBTBD3Q8NAB2 608 aa21.53■■□□□ 1.04
CD40-201ENST00000372276 RBSNQ9H1K0 784 aa21.53■■□□□ 1.04
CD40-201ENST00000372276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.53■■□□□ 1.04
CD40-201ENST00000372276 SYCE3A1L190 88 aa21.52■■□□□ 1.04
CD40-201ENST00000372276 PDLIM2Q96JY6 352 aa21.52■■□□□ 1.04
CD40-201ENST00000372276 RBM27Q9P2N5 1060 aaKnown RBP21.52■■□□□ 1.04
CD40-201ENST00000372276 ABCA3Q99758 1704 aa21.52■■□□□ 1.03
CD40-201ENST00000372276 EYA2O00167 538 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 ME3Q16798 604 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 ZSCAN30Q86W11 494 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 MTMR6Q9Y217 621 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 AKAP2Q9Y2D5 859 aa21.51■■□□□ 1.03
CD40-201ENST00000372276 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
CD40-201ENST00000372276 TMOD3Q9NYL9 352 aa21.5■■□□□ 1.03
CD40-201ENST00000372276 MCM5P33992 734 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 TCIRG1Q13488 830 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 LARP1BQ659C4 914 aaKnown RBP21.49■■□□□ 1.03
CD40-201ENST00000372276 ATG9AQ7Z3C6 839 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 NEK1Q96PY6 1258 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 DSCC1Q9BVC3 393 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 PLA2G12BQ9BX93 195 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 CHMP3Q9Y3E7 222 aa21.49■■□□□ 1.03
CD40-201ENST00000372276 CPA1P15085 419 aa21.48■■□□□ 1.03
CD40-201ENST00000372276 PIP4K2AP48426 406 aaPredicted RBP21.48■■□□□ 1.03
CD40-201ENST00000372276 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
CD40-201ENST00000372276 LARGE1O95461 756 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 STARD3NLO95772 234 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 TJP1Q07157 1748 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 KIF6Q6ZMV9 814 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 DNAJC2Q99543 621 aaKnown RBP21.47■■□□□ 1.03
CD40-201ENST00000372276 SHANK3Q9BYB0 1731 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 NSFL1CQ9UNZ2 370 aaKnown RBP21.47■■□□□ 1.03
CD40-201ENST00000372276 TCHHQ07283 1943 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 ABCC12Q96J65 1359 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 A1BGP04217 495 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 HSP90AB3PQ58FF7 597 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
CD40-201ENST00000372276 CEP126Q9P2H0 1117 aa21.47■■□□□ 1.03
CD40-201ENST00000372276 ELP1O95163 1332 aa21.46■■□□□ 1.03
CD40-201ENST00000372276 PCCAP05165 728 aaPredicted RBP21.46■■□□□ 1.03
CD40-201ENST00000372276 MSNP26038 577 aaKnown RBP21.46■■□□□ 1.03
CD40-201ENST00000372276 KRT85P78386 507 aa21.46■■□□□ 1.03
CD40-201ENST00000372276 CCDC57Q2TAC2 916 aa21.46■■□□□ 1.03
CD40-201ENST00000372276 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
CD40-201ENST00000372276 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
CD40-201ENST00000372276 CNPY2Q9Y2B0 182 aa21.46■■□□□ 1.03
CD40-201ENST00000372276 KIF3AQ9Y496 699 aa21.46■■□□□ 1.03
CD40-201ENST00000372276 ZFYP08048 801 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms