RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ZSCAN30Q86W11 494 aa20.33■□□□□ 0.85
VEGFA-205ENST00000372067 DBNLQ9UJU6 430 aaKnown RBP20.33■□□□□ 0.85
VEGFA-205ENST00000372067 LRRC37A3O60309 1634 aa20.33■□□□□ 0.85
VEGFA-205ENST00000372067 SYCE3A1L190 88 aa20.33■□□□□ 0.84
VEGFA-205ENST00000372067 PTPN12Q05209 780 aaKnown RBP20.33■□□□□ 0.84
VEGFA-205ENST00000372067 WASHC4Q2M389 1173 aa20.33■□□□□ 0.84
VEGFA-205ENST00000372067 FAM89AQ96GI7 184 aa20.33■□□□□ 0.84
VEGFA-205ENST00000372067 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 STARD3NLO95772 234 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-205ENST00000372067 ZDHHC9Q9Y397 364 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 CARD10Q9BWT7 1032 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
VEGFA-205ENST00000372067 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-205ENST00000372067 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
VEGFA-205ENST00000372067 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 IFIT1P09914 478 aaKnown RBP20.3■□□□□ 0.84
VEGFA-205ENST00000372067 GJB2P29033 226 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 COPRSQ9NQ92 184 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 ZSCAN23Q3MJ62 389 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 SYAP1Q96A49 352 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-205ENST00000372067 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
VEGFA-205ENST00000372067 INTS4Q96HW7 963 aaKnown RBP20.3■□□□□ 0.84
VEGFA-205ENST00000372067 EXOC5O00471 708 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 CHGBP05060 677 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 TTC39AQ5SRH9 613 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
VEGFA-205ENST00000372067 ZNF589Q86UQ0 364 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-205ENST00000372067 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 SLC27A2O14975 620 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 STX6O43752 255 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 KIF20AO95235 890 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 LARP1BQ659C4 914 aaKnown RBP20.28■□□□□ 0.84
VEGFA-205ENST00000372067 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 PPFIA3O75145 1194 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 MBD3O95983 291 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 PTMAP06454 111 aaKnown RBP20.28■□□□□ 0.84
VEGFA-205ENST00000372067 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-205ENST00000372067 CUL4AQ13619 759 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 TBC1D2BQ9UPU7 963 aa20.28■□□□□ 0.84
VEGFA-205ENST00000372067 LARGE1O95461 756 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 PUS3Q9BZE2 481 aaKnown RBP20.27■□□□□ 0.84
VEGFA-205ENST00000372067 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 BRD1O95696 1058 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 ZSCAN31Q96LW9 406 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-205ENST00000372067 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.27■□□□□ 0.84
VEGFA-205ENST00000372067 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.84
VEGFA-205ENST00000372067 CCDC158Q5M9N0 1113 aa20.27■□□□□ 0.83
VEGFA-205ENST00000372067 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
VEGFA-205ENST00000372067 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
VEGFA-205ENST00000372067 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
VEGFA-205ENST00000372067 SYT1P21579 422 aa20.26■□□□□ 0.83
VEGFA-205ENST00000372067 IL15P40933 162 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-205ENST00000372067 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
VEGFA-205ENST00000372067 DDX11Q96FC9 970 aa20.26■□□□□ 0.83
VEGFA-205ENST00000372067 UTYO14607 1347 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
VEGFA-205ENST00000372067 ATP5JP18859 108 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 GPT2Q8TD30 523 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 PIGBQ92521 554 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 PPP1R9BQ96SB3 815 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
VEGFA-205ENST00000372067 DCCP43146 1447 aa20.25■□□□□ 0.83
VEGFA-205ENST00000372067 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-205ENST00000372067 CBX1P83916 185 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 H3BQV1 296 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 EYA2O00167 538 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-205ENST00000372067 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
VEGFA-205ENST00000372067 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
VEGFA-205ENST00000372067 A0A1B0GUL7 405 aa20.24■□□□□ 0.83
VEGFA-205ENST00000372067 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
VEGFA-205ENST00000372067 DYNC1I1O14576 645 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 MTERF4Q7Z6M4 381 aaKnown RBP20.23■□□□□ 0.83
VEGFA-205ENST00000372067 SECISBP2LQ93073 1101 aaKnown RBP20.23■□□□□ 0.83
VEGFA-205ENST00000372067 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-205ENST00000372067 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 LMO7Q8WWI1 1683 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-205ENST00000372067 APPP05067 770 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 LDHAL6AQ6ZMR3 332 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 SYNE4Q8N205 404 aa20.23■□□□□ 0.83
VEGFA-205ENST00000372067 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-205ENST00000372067 CPDO75976 1380 aa20.22■□□□□ 0.83
VEGFA-205ENST00000372067 H7C1W4 665 aa20.22■□□□□ 0.83
VEGFA-205ENST00000372067 ME3Q16798 604 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms