RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 ARFGAP3Q9NP61 516 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 RAB11FIP3O75154 756 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 SCAPERQ9BY12 1400 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 TTC19Q6DKK2 380 aaPredicted RBP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 DAPK3O43293 454 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 SYTL4Q96C24 671 aaPredicted RBP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 RABEP2Q9H5N1 569 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 GPR161Q8N6U8 529 aaKnown RBP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 FAF1Q9UNN5 650 aaPredicted RBP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 SCINQ9Y6U3 715 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 TBC1D5Q92609 795 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 UTP14AQ9BVJ6 771 aaKnown RBP9.87□□□□□ -0.83
VANGL1-204ENST00000369510 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
VANGL1-204ENST00000369510 APAF1O14727 1248 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PSMD7P51665 324 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CDCA7LQ96GN5 454 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PDCLQ13371 301 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CEP85LQ5SZL2 805 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CWC27Q6UX04 472 aaKnown RBP9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PFDN1O60925 122 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC184Q52MB2 194 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CHMP6Q96FZ7 201 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 ME1P48163 572 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 SCLT1Q96NL6 688 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 CDC45O75419 566 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PHEXP78562 749 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 DEUP1Q05D60 604 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PHF23Q9BUL5 403 aaPredicted RBP9.86□□□□□ -0.83
VANGL1-204ENST00000369510 PRDM1O75626 825 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 MTRF1LQ9UGC7 380 aaKnown RBP9.86□□□□□ -0.83
VANGL1-204ENST00000369510 ORC6Q9Y5N6 252 aa9.86□□□□□ -0.83
VANGL1-204ENST00000369510 AMPD3Q01432 767 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC63Q8NA47 563 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 CLNS1AP54105 237 aaKnown RBP9.85□□□□□ -0.83
VANGL1-204ENST00000369510 RNF10Q8N5U6 811 aaKnown RBP9.85□□□□□ -0.83
VANGL1-204ENST00000369510 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 PLEKHH1Q9ULM0 1364 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
VANGL1-204ENST00000369510 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 SPATS2Q86XZ4 545 aaKnown RBP9.85□□□□□ -0.83
VANGL1-204ENST00000369510 CUL5Q93034 780 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
VANGL1-204ENST00000369510 TMEM266Q2M3C6 531 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 NECAB1Q8N987 351 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 TRAK2O60296 914 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 KCNA4P22459 653 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 KRT32Q14532 448 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 NKIRAS1Q9NYS0 192 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 BAG5Q9UL15 447 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 ZNF76P36508 570 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
VANGL1-204ENST00000369510 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 SLC8A1P32418 973 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 LONP1P36776 959 aaKnown RBP9.84□□□□□ -0.83
VANGL1-204ENST00000369510 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 KIFC3Q9BVG8 833 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 SCOCQ9UIL1 159 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 COG7P83436 770 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 CPLX4Q7Z7G2 160 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 PPP6R3Q5H9R7 873 aaPredicted RBP9.84□□□□□ -0.83
VANGL1-204ENST00000369510 SPTY2D1Q68D10 685 aaPredicted RBP9.84□□□□□ -0.83
VANGL1-204ENST00000369510 CCDC125Q86Z20 511 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 NEK11Q8NG66 645 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 JADE2Q9NQC1 790 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 ESRRGP62508 458 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 DDX42Q86XP3 938 aaKnown RBP eCLIP9.84□□□□□ -0.83
VANGL1-204ENST00000369510 MCUR1Q96AQ8 359 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
VANGL1-204ENST00000369510 HNRNPCL2B2RXH8 293 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 HNRNPCL1O60812 293 aaKnown RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 ANO10Q9NW15 660 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 PCYT1AP49585 367 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 CXorf38Q8TB03 319 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 WWC3Q9ULE0 1092 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 MAD1L1Q9Y6D9 718 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 GLE1Q53GS7 698 aaKnown RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 KANK3Q6NY19 840 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 RUFY4Q6ZNE9 571 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 CTNNA3Q9UI47 895 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 TRIM4Q9C037 500 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 SCHIP1Q9P0W5 487 aaPredicted RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 TOP1P11387 765 aaKnown RBP9.83□□□□□ -0.84
VANGL1-204ENST00000369510 GRIN1Q05586 938 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 TRIML1Q8N9V2 468 aa9.83□□□□□ -0.84
VANGL1-204ENST00000369510 SKIP12755 728 aa9.82□□□□□ -0.84
VANGL1-204ENST00000369510 STX17P56962 302 aa9.82□□□□□ -0.84
VANGL1-204ENST00000369510 ANKRD35Q8N283 1001 aa9.82□□□□□ -0.84
VANGL1-204ENST00000369510 NUP62CLQ9H1M0 184 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms