RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 HMMRO75330 724 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 LEO1Q8WVC0 666 aaPredicted RBP15.31■□□□□ 0.04
NCSTN-202ENST00000368063 VPS18Q9P253 973 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 LONRF2Q1L5Z9 754 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 NBPF6Q5VWK0 638 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
NCSTN-202ENST00000368063 FERMT3Q86UX7 667 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 SPATA32Q96LK8 384 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 NBPF4Q96M43 638 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
NCSTN-202ENST00000368063 TULP4Q9NRJ4 1543 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 STX1AQ16623 288 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 LRRC31Q6UY01 552 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 MROH2AA6NES4 1674 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 URI1O94763 535 aaPredicted RBP15.3■□□□□ 0.04
NCSTN-202ENST00000368063 SMC2O95347 1197 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
NCSTN-202ENST00000368063 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 IFIT2P09913 472 aaKnown RBP15.3■□□□□ 0.04
NCSTN-202ENST00000368063 CPA1P15085 419 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 HOMER1Q86YM7 354 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 STAP2Q9UGK3 403 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
NCSTN-202ENST00000368063 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 ADCY9O60503 1353 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
NCSTN-202ENST00000368063 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 GGNBP2Q9H3C7 697 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 SH2B1Q9NRF2 756 aaPredicted RBP15.29■□□□□ 0.04
NCSTN-202ENST00000368063 PPLO60437 1756 aa15.29■□□□□ 0.04
NCSTN-202ENST00000368063 NPATQ14207 1427 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 A0A087WUV0 522 aaPredicted RBP15.28■□□□□ 0.04
NCSTN-202ENST00000368063 ZRSR1Q15695 479 aaKnown RBP15.28■□□□□ 0.04
NCSTN-202ENST00000368063 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
NCSTN-202ENST00000368063 LSG1Q9H089 658 aaKnown RBP15.28■□□□□ 0.04
NCSTN-202ENST00000368063 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 BECN2A8MW95 431 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 HSP90AB3PQ58FF7 597 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 KAT2BQ92831 832 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
NCSTN-202ENST00000368063 CCDC151A5D8V7 595 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 LARP1BQ659C4 914 aaKnown RBP15.27■□□□□ 0.04
NCSTN-202ENST00000368063 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 PHACTR3Q96KR7 559 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
NCSTN-202ENST00000368063 TFIP11Q9UBB9 837 aaKnown RBP15.27■□□□□ 0.04
NCSTN-202ENST00000368063 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
NCSTN-202ENST00000368063 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
NCSTN-202ENST00000368063 SGSM2O43147 1006 aa15.27■□□□□ 0.03
NCSTN-202ENST00000368063 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.03
NCSTN-202ENST00000368063 DNAAF4Q8WXU2 420 aa15.27■□□□□ 0.03
NCSTN-202ENST00000368063 PIK3C2BO00750 1634 aa15.27■□□□□ 0.03
NCSTN-202ENST00000368063 CCP110O43303 1012 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 CWC27Q6UX04 472 aaKnown RBP15.26■□□□□ 0.03
NCSTN-202ENST00000368063 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 FAN1Q9Y2M0 1017 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
NCSTN-202ENST00000368063 PSME1Q06323 249 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 ME3Q16798 604 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 PLEKHO1Q53GL0 409 aaPredicted RBP15.26■□□□□ 0.03
NCSTN-202ENST00000368063 VPS53Q5VIR6 699 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
NCSTN-202ENST00000368063 TRDNQ13061 729 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 BRD3Q15059 726 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 KCNV1Q6PIU1 500 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 CHD2O14647 1828 aaKnown RBP15.25■□□□□ 0.03
NCSTN-202ENST00000368063 AOX1Q06278 1338 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 N4BP1O75113 896 aaKnown RBP15.25■□□□□ 0.03
NCSTN-202ENST00000368063 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 PPP2R3AQ06190 1150 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 AOPEPQ8N6M6 819 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 CD163L1Q9NR16 1453 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 TMC6Q7Z403 805 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 RAI14Q9P0K7 980 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 MRFAP1Q9Y605 127 aa15.25■□□□□ 0.03
NCSTN-202ENST00000368063 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
NCSTN-202ENST00000368063 GNL2Q13823 731 aaKnown RBP15.24■□□□□ 0.03
NCSTN-202ENST00000368063 NECAB1Q8N987 351 aa15.24■□□□□ 0.03
NCSTN-202ENST00000368063 HNRNPLLQ8WVV9 542 aaKnown RBP15.24■□□□□ 0.03
NCSTN-202ENST00000368063 DLG5Q8TDM6 1919 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms