RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PLA2G12BQ9BX93 195 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 CDHR2Q9BYE9 1310 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 APBB1O00213 710 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 FOXO4P98177 505 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 ERC1Q8IUD2 1116 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 ZNF652Q9Y2D9 606 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 SMARCA5O60264 1052 aaPredicted RBP14.87□□□□□ -0.03
USF1-203ENST00000368021 NFIXQ14938 502 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 JARID2Q92833 1246 aaPredicted RBP14.87□□□□□ -0.03
USF1-203ENST00000368021 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
USF1-203ENST00000368021 DDR1Q08345 913 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 PARP10Q53GL7 1025 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 TBC1D9BQ66K14 1250 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 OSBPL3Q9H4L5 887 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 COPRSQ9NQ92 184 aa14.86□□□□□ -0.03
USF1-203ENST00000368021 GPTP24298 496 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 RFX5P48382 616 aaPredicted RBP14.85□□□□□ -0.03
USF1-203ENST00000368021 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 UBN2Q6ZU65 1347 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 SALL3Q9BXA9 1300 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 SCN7AQ01118 1682 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 TM4SF1P30408 202 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 LMBR1LQ6UX01 489 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
USF1-203ENST00000368021 NLGN2Q8NFZ4 835 aa14.85□□□□□ -0.03
USF1-203ENST00000368021 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
USF1-203ENST00000368021 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
USF1-203ENST00000368021 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
USF1-203ENST00000368021 FAM89AQ96GI7 184 aa14.84□□□□□ -0.03
USF1-203ENST00000368021 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
USF1-203ENST00000368021 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
USF1-203ENST00000368021 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
USF1-203ENST00000368021 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
USF1-203ENST00000368021 OTUD7AQ8TE49 926 aaPredicted RBP14.83□□□□□ -0.04
USF1-203ENST00000368021 TRMT112Q9UI30 125 aaKnown RBP14.83□□□□□ -0.04
USF1-203ENST00000368021 CSF1RP07333 972 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 PDE1AP54750 535 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 TTC22Q5TAA0 569 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 SETDB2Q96T68 719 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 STAP2Q9UGK3 403 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 AOX1Q06278 1338 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 MYH3P11055 1940 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 SERPINB2P05120 415 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 HSP90B1P14625 803 aaKnown RBP14.82□□□□□ -0.04
USF1-203ENST00000368021 MX1P20591 662 aa14.82□□□□□ -0.04
USF1-203ENST00000368021 CLASRPQ8N2M8 674 aaKnown RBP14.82□□□□□ -0.04
USF1-203ENST00000368021 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
USF1-203ENST00000368021 IRS4O14654 1257 aaPredicted RBP14.81□□□□□ -0.04
USF1-203ENST00000368021 NPHP1O15259 732 aa14.81□□□□□ -0.04
USF1-203ENST00000368021 UTP14AQ9BVJ6 771 aaKnown RBP14.81□□□□□ -0.04
USF1-203ENST00000368021 IL1RAPL2Q9NP60 686 aa14.81□□□□□ -0.04
USF1-203ENST00000368021 NIP7Q9Y221 180 aaKnown RBP eCLIP14.81□□□□□ -0.04
USF1-203ENST00000368021 SH3TC1Q8TE82 1336 aa14.81□□□□□ -0.04
USF1-203ENST00000368021 PDE8AO60658 829 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 SASH1O94885 1247 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
USF1-203ENST00000368021 SUSD4Q5VX71 490 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 CD2APQ9Y5K6 639 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
USF1-203ENST00000368021 NTSR2O95665 410 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 CTSWP56202 376 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 SYNE4Q8N205 404 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 TTLL11Q8NHH1 800 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 SIL1Q9H173 461 aa14.79□□□□□ -0.04
USF1-203ENST00000368021 LAMB2P55268 1798 aa14.78□□□□□ -0.04
USF1-203ENST00000368021 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
USF1-203ENST00000368021 CIAO1O76071 339 aa14.78□□□□□ -0.04
USF1-203ENST00000368021 CARMIL3Q8ND23 1372 aa14.78□□□□□ -0.04
USF1-203ENST00000368021 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
USF1-203ENST00000368021 NBPF5PQ86XG9 351 aaPredicted RBP14.78□□□□□ -0.04
USF1-203ENST00000368021 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.05
USF1-203ENST00000368021 IFIT5Q13325 482 aaKnown RBP14.77□□□□□ -0.05
USF1-203ENST00000368021 EYA2O00167 538 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 PRR5LQ6MZQ0 368 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 NUTM1Q86Y26 1132 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 DDX60Q8IY21 1712 aaKnown RBP14.76□□□□□ -0.05
USF1-203ENST00000368021 IFIT2P09913 472 aaKnown RBP14.76□□□□□ -0.05
USF1-203ENST00000368021 DPEP1P16444 411 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 GTF2E1P29083 439 aaPredicted RBP14.76□□□□□ -0.05
USF1-203ENST00000368021 CHRNA5P30532 468 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 GPR162Q16538 588 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
USF1-203ENST00000368021 NYXQ9GZU5 481 aa14.76□□□□□ -0.05
USF1-203ENST00000368021 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 CDC45O75419 566 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 SDSP20132 328 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 AACSQ86V21 672 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 PI4K2BQ8TCG2 481 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 GREM2Q9H772 168 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
USF1-203ENST00000368021 ANKRD18BA2A2Z9 1011 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 ERC2O15083 957 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 ITGA6P23229 1130 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms