RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
H3F3A-202ENST00000366814 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 ZPR1O75312 459 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 GYS1P13807 737 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 RHPN1Q8TCX5 695 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 CD2APQ9Y5K6 639 aa13.31□□□□□ -0.28
H3F3A-202ENST00000366814 SNX21Q969T3 373 aa13.3□□□□□ -0.28
H3F3A-202ENST00000366814 SRP68Q9UHB9 627 aaKnown RBP13.3□□□□□ -0.28
H3F3A-202ENST00000366814 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
H3F3A-202ENST00000366814 NEURL1BA8MQ27 555 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 ERC2O15083 957 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 MYD88Q99836 296 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
H3F3A-202ENST00000366814 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 IL1RAPL2Q9NP60 686 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 PARP3Q9Y6F1 533 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
H3F3A-202ENST00000366814 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
H3F3A-202ENST00000366814 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
H3F3A-202ENST00000366814 GCKRQ14397 625 aa13.28□□□□□ -0.28
H3F3A-202ENST00000366814 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
H3F3A-202ENST00000366814 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
H3F3A-202ENST00000366814 ZNF330Q9Y3S2 320 aaPredicted RBP13.28□□□□□ -0.28
H3F3A-202ENST00000366814 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.28
H3F3A-202ENST00000366814 RILPL2Q969X0 211 aa13.27□□□□□ -0.28
H3F3A-202ENST00000366814 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.28
H3F3A-202ENST00000366814 TTC41PQ6P2S7 1318 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 A1BGP04217 495 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 YY1P25490 414 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.29
H3F3A-202ENST00000366814 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 COL15A1P39059 1388 aa13.27□□□□□ -0.29
H3F3A-202ENST00000366814 A0A087WZG4 1122 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 RABEP1Q15276 862 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
H3F3A-202ENST00000366814 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
H3F3A-202ENST00000366814 MCCP23508 829 aa13.25□□□□□ -0.29
H3F3A-202ENST00000366814 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
H3F3A-202ENST00000366814 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
H3F3A-202ENST00000366814 IFIT2P09913 472 aaKnown RBP13.25□□□□□ -0.29
H3F3A-202ENST00000366814 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
H3F3A-202ENST00000366814 CHD4Q14839 1912 aa13.25□□□□□ -0.29
H3F3A-202ENST00000366814 GLRX3O76003 335 aaKnown RBP13.24□□□□□ -0.29
H3F3A-202ENST00000366814 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
H3F3A-202ENST00000366814 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
H3F3A-202ENST00000366814 PIP4K2AP48426 406 aaPredicted RBP13.24□□□□□ -0.29
H3F3A-202ENST00000366814 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
H3F3A-202ENST00000366814 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 TM4SF1P30408 202 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 KIF2CQ99661 725 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
H3F3A-202ENST00000366814 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.299e-12■■■□□ 16.6
H3F3A-202ENST00000366814 CHMLP26374 656 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
H3F3A-202ENST00000366814 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
H3F3A-202ENST00000366814 ST18O60284 1047 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 TGFB2P61812 414 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 DDR1Q08345 913 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
H3F3A-202ENST00000366814 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 KAZALD1Q96I82 304 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 ECHDC1Q9NTX5 307 aa13.22□□□□□ -0.29
H3F3A-202ENST00000366814 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
H3F3A-202ENST00000366814 PA2G4Q9UQ80 394 aaKnown RBP13.22□□□□□ -0.29
H3F3A-202ENST00000366814 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
H3F3A-202ENST00000366814 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
H3F3A-202ENST00000366814 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
H3F3A-202ENST00000366814 NFIXQ14938 502 aa13.21□□□□□ -0.29
H3F3A-202ENST00000366814 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
H3F3A-202ENST00000366814 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 AACSQ86V21 672 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.3
H3F3A-202ENST00000366814 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 IL27Q8NEV9 243 aa13.21□□□□□ -0.3
H3F3A-202ENST00000366814 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
H3F3A-202ENST00000366814 RUFY2Q8WXA3 655 aa13.2□□□□□ -0.3
H3F3A-202ENST00000366814 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
H3F3A-202ENST00000366814 COPRSQ9NQ92 184 aa13.2□□□□□ -0.3
H3F3A-202ENST00000366814 SERPINB2P05120 415 aa13.19□□□□□ -0.3
H3F3A-202ENST00000366814 DPEP1P16444 411 aa13.19□□□□□ -0.3
H3F3A-202ENST00000366814 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
H3F3A-202ENST00000366814 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms