RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 CDHR2Q9BYE9 1310 aa26.77■■□□□ 1.88
PARP1-202ENST00000366792 PDE8AO60658 829 aa26.77■■□□□ 1.88
PARP1-202ENST00000366792 LINS1Q8NG48 757 aa26.77■■□□□ 1.88
PARP1-202ENST00000366792 GCKRQ14397 625 aa26.76■■□□□ 1.87
PARP1-202ENST00000366792 GRIPAP1Q4V328 841 aa26.76■■□□□ 1.87
PARP1-202ENST00000366792 UBE3BQ7Z3V4 1068 aa26.76■■□□□ 1.87
PARP1-202ENST00000366792 MRPL50Q8N5N7 158 aaKnown RBP26.75■■□□□ 1.87
PARP1-202ENST00000366792 PSMD1Q99460 953 aa26.75■■□□□ 1.87
PARP1-202ENST00000366792 BCL2L13Q9BXK5 485 aa26.75■■□□□ 1.87
PARP1-202ENST00000366792 CCDC152Q4G0S7 254 aa26.74■■□□□ 1.87
PARP1-202ENST00000366792 SP8Q8IXZ3 490 aa26.74■■□□□ 1.87
PARP1-202ENST00000366792 SSH1Q8WYL5 1049 aa26.74■■□□□ 1.87
PARP1-202ENST00000366792 CCDC85AQ96PX6 553 aaPredicted RBP26.74■■□□□ 1.87
PARP1-202ENST00000366792 NMRK2Q9NPI5 230 aa26.74■■□□□ 1.87
PARP1-202ENST00000366792 IARSP41252 1262 aaKnown RBP26.73■■□□□ 1.87
PARP1-202ENST00000366792 SLC4A10Q6U841 1118 aa26.73■■□□□ 1.87
PARP1-202ENST00000366792 CELF1Q92879 486 aaKnown RBP26.73■■□□□ 1.87
PARP1-202ENST00000366792 H7C1W4 665 aa26.72■■□□□ 1.87
PARP1-202ENST00000366792 BEND3Q5T5X7 828 aa26.72■■□□□ 1.87
PARP1-202ENST00000366792 TMC4Q7Z404 712 aa26.72■■□□□ 1.87
PARP1-202ENST00000366792 GLTPD2A6NH11 291 aa26.71■■□□□ 1.87
PARP1-202ENST00000366792 CT47B1P0C2W7 299 aaPredicted RBP26.71■■□□□ 1.87
PARP1-202ENST00000366792 CTSWP56202 376 aa26.71■■□□□ 1.87
PARP1-202ENST00000366792 SEC31BQ9NQW1 1179 aa26.71■■□□□ 1.87
PARP1-202ENST00000366792 SMC4Q9NTJ3 1288 aa26.71■■□□□ 1.87
PARP1-202ENST00000366792 MYH3P11055 1940 aa26.71■■□□□ 1.87
PARP1-202ENST00000366792 COL4A1P02462 1669 aa26.7■■□□□ 1.87
PARP1-202ENST00000366792 ALDH1L2Q3SY69 923 aa26.7■■□□□ 1.86
PARP1-202ENST00000366792 DPY19L2Q6NUT2 758 aa26.7■■□□□ 1.86
PARP1-202ENST00000366792 DPP8Q6V1X1 898 aaPredicted RBP26.7■■□□□ 1.86
PARP1-202ENST00000366792 KIF3CO14782 793 aa26.69■■□□□ 1.86
PARP1-202ENST00000366792 MPNDQ8N594 471 aa26.69■■□□□ 1.86
PARP1-202ENST00000366792 PTPRCP08575 1304 aa26.68■■□□□ 1.86
PARP1-202ENST00000366792 LRRC37AA6NMS7 1700 aa26.68■■□□□ 1.86
PARP1-202ENST00000366792 RPS8P62241 208 aaKnown RBP26.68■■□□□ 1.86
PARP1-202ENST00000366792 C1QTNF8P60827 252 aa26.67■■□□□ 1.86
PARP1-202ENST00000366792 LARGE2Q8N3Y3 721 aa26.67■■□□□ 1.86
PARP1-202ENST00000366792 SUPT20HQ8NEM7 779 aa26.67■■□□□ 1.86
PARP1-202ENST00000366792 JDP2Q8WYK2 163 aa26.67■■□□□ 1.86
PARP1-202ENST00000366792 RRAGCQ9HB90 399 aa26.67■■□□□ 1.86
PARP1-202ENST00000366792 CASP7P55210 303 aa26.66■■□□□ 1.86
PARP1-202ENST00000366792 TTLL11Q8NHH1 800 aa26.66■■□□□ 1.86
PARP1-202ENST00000366792 SRCIN1Q9C0H9 1055 aa26.66■■□□□ 1.86
PARP1-202ENST00000366792 PPIP5K2O43314 1243 aa26.65■■□□□ 1.86
PARP1-202ENST00000366792 ALDH1L1O75891 902 aa26.65■■□□□ 1.86
PARP1-202ENST00000366792 GREM2Q9H772 168 aa26.65■■□□□ 1.86
PARP1-202ENST00000366792 AOC3Q16853 763 aa26.64■■□□□ 1.86
PARP1-202ENST00000366792 ANKRD18AQ8IVF6 992 aa26.64■■□□□ 1.86
PARP1-202ENST00000366792 C16orf71Q8IYS4 520 aaPredicted RBP26.64■■□□□ 1.86
PARP1-202ENST00000366792 CDC5LQ99459 802 aaKnown RBP26.64■■□□□ 1.86
PARP1-202ENST00000366792 PLA2G12BQ9BX93 195 aa26.64■■□□□ 1.86
PARP1-202ENST00000366792 RTFDC1Q9BY42 306 aaPredicted RBP26.64■■□□□ 1.86
PARP1-202ENST00000366792 C9orf78Q9NZ63 289 aaPredicted RBP26.64■■□□□ 1.86
PARP1-202ENST00000366792 NSFL1CQ9UNZ2 370 aaKnown RBP26.64■■□□□ 1.86
PARP1-202ENST00000366792 COL4A5P29400 1685 aa26.63■■□□□ 1.85
PARP1-202ENST00000366792 GRM8O00222 908 aa26.63■■□□□ 1.85
PARP1-202ENST00000366792 DDNO94850 711 aaPredicted RBP26.63■■□□□ 1.85
PARP1-202ENST00000366792 ZNF541Q9H0D2 1346 aa26.63■■□□□ 1.85
PARP1-202ENST00000366792 NIM1KQ8IY84 436 aa26.62■■□□□ 1.85
PARP1-202ENST00000366792 DUOX1Q9NRD9 1551 aa26.62■■□□□ 1.85
PARP1-202ENST00000366792 RTL9Q8NET4 1388 aa26.61■■□□□ 1.85
PARP1-202ENST00000366792 GPSM2P81274 684 aa26.61■■□□□ 1.85
PARP1-202ENST00000366792 VPS33BQ9H267 617 aa26.61■■□□□ 1.85
PARP1-202ENST00000366792 WDR90Q96KV7 1748 aa26.61■■□□□ 1.85
PARP1-202ENST00000366792 SPEF2Q9C093 1822 aa26.6■■□□□ 1.85
PARP1-202ENST00000366792 FZD9O00144 591 aa26.6■■□□□ 1.85
PARP1-202ENST00000366792 VEGFAP15692 232 aaPredicted RBP26.6■■□□□ 1.85
PARP1-202ENST00000366792 RARSP54136 660 aaKnown RBP26.6■■□□□ 1.85
PARP1-202ENST00000366792 ZBED9Q6R2W3 1325 aa26.6■■□□□ 1.85
PARP1-202ENST00000366792 EIF6P56537 245 aaKnown RBP26.59■■□□□ 1.85
PARP1-202ENST00000366792 FAM161AQ3B820 660 aa26.59■■□□□ 1.85
PARP1-202ENST00000366792 NOB1Q9ULX3 412 aaKnown RBP26.59■■□□□ 1.85
PARP1-202ENST00000366792 C6orf229H3BNL8 230 aa26.58■■□□□ 1.85
PARP1-202ENST00000366792 TOMM70O94826 608 aa26.58■■□□□ 1.85
PARP1-202ENST00000366792 ITGA6P23229 1130 aa26.58■■□□□ 1.85
PARP1-202ENST00000366792 ANKIB1Q9P2G1 1089 aa26.58■■□□□ 1.85
PARP1-202ENST00000366792 CHMP3Q9Y3E7 222 aa26.58■■□□□ 1.85
PARP1-202ENST00000366792 CSF1RP07333 972 aa26.57■■□□□ 1.84
PARP1-202ENST00000366792 KIAA2012Q0VF49 1180 aa26.57■■□□□ 1.84
PARP1-202ENST00000366792 LTBP1Q14766 1721 aa26.56■■□□□ 1.84
PARP1-202ENST00000366792 IGHMBP2P38935 993 aaKnown RBP26.56■■□□□ 1.84
PARP1-202ENST00000366792 FOXO4P98177 505 aa26.56■■□□□ 1.84
PARP1-202ENST00000366792 POLLQ9UGP5 575 aa26.56■■□□□ 1.84
PARP1-202ENST00000366792 BRPF1P55201 1214 aaPredicted RBP26.55■■□□□ 1.84
PARP1-202ENST00000366792 WASHC4Q2M389 1173 aa26.55■■□□□ 1.84
PARP1-202ENST00000366792 BSDC1Q9NW68 430 aaPredicted RBP26.55■■□□□ 1.84
PARP1-202ENST00000366792 GJA3Q9Y6H8 435 aa26.55■■□□□ 1.84
PARP1-202ENST00000366792 KIF16BQ96L93 1317 aa26.55■■□□□ 1.84
PARP1-202ENST00000366792 ANKRD18BA2A2Z9 1011 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 POTECB2RU33 542 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 UFL1O94874 794 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 NBPF7P0C2Y1 421 aaPredicted RBP26.54■■□□□ 1.84
PARP1-202ENST00000366792 EPHA10Q5JZY3 1008 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 GPC2Q8N158 579 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 TBC1D16Q8TBP0 767 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 EYA3Q99504 573 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 API5Q9BZZ5 524 aaKnown RBP26.54■■□□□ 1.84
PARP1-202ENST00000366792 PODXL2Q9NZ53 605 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 GGA1Q9UJY5 639 aa26.54■■□□□ 1.84
PARP1-202ENST00000366792 ZNRF3Q9ULT6 936 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms