RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CNTN3Q9P232 1028 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 FOXD3Q9UJU5 478 aaPredicted RBP7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.53□□□□□ -1.2
RNU6-560P-201ENST00000364007 TREHO43280 583 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 MMP20O60882 483 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 WFS1O76024 890 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 EHHADHQ08426 723 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 ORC1Q13415 861 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 PDE12Q6L8Q7 609 aaKnown RBP7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 NPAS4Q8IUM7 802 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 PNMA5Q96PV4 448 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 KLF15Q9UIH9 416 aa7.52□□□□□ -1.21
RNU6-560P-201ENST00000364007 IGF1RP08069 1367 aa7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 TNFRSF21O75509 655 aa7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 RARAP10276 462 aa7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 SYT9Q86SS6 491 aa7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 C1orf127Q8N9H9 656 aa7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 FOXD4L4Q8WXT5 416 aaPredicted RBP7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 ABI2Q9NYB9 513 aaPredicted RBP7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.51□□□□□ -1.21
RNU6-560P-201ENST00000364007 GMPRP36959 345 aa7.5□□□□□ -1.21
RNU6-560P-201ENST00000364007 ALKBH8Q96BT7 664 aaKnown RBP7.5□□□□□ -1.21
RNU6-560P-201ENST00000364007 IGFLR1Q9H665 355 aa7.5□□□□□ -1.21
RNU6-560P-201ENST00000364007 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 MAPK8P45983 427 aa7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 TTC39BQ5VTQ0 682 aaPredicted RBP7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 CHRDQ9H2X0 955 aa7.49□□□□□ -1.21
RNU6-560P-201ENST00000364007 ZBTB42B2RXF5 422 aa7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 FMR1Q06787 632 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 TREML4Q6UXN2 200 aa7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 SETDB2Q96T68 719 aa7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 ZFYVE28Q9HCC9 887 aa7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 TLR7Q9NYK1 1049 aaKnown RBP7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
RNU6-560P-201ENST00000364007 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 EREGO14944 169 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 PHACTR2O75167 634 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 MAP3K6O95382 1288 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 ADAMTS2O95450 1211 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 ERCC3P19447 782 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 MAP2K3P46734 347 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 NEUROD1Q13562 356 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 FCHSD1Q86WN1 690 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 OR13H1Q8NG92 308 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 CSRNP1Q96S65 589 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 EFCC1Q9HA90 598 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 KANSL3Q9P2N6 904 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 GGA1Q9UJY5 639 aa7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
RNU6-560P-201ENST00000364007 PNMA6FA0A0J9YX94 578 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 EIF1AYO14602 144 aaKnown RBP7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 PSAPP07602 524 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 ARAFP10398 606 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 MLLT1Q03111 559 aaPredicted RBP7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 HFE2Q6ZVN8 426 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 SNX29Q8TEQ0 813 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 ACDQ96AP0 544 aa7.46□□□□□ -1.22
RNU6-560P-201ENST00000364007 J3QW42 95 aa7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 CPNE3O75131 537 aaKnown RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 SIN3BO75182 1162 aa7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 CES1P23141 567 aa7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 EAPPQ56P03 285 aaPredicted RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 FBXO33Q7Z6M2 555 aa7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 AVENQ9NQS1 362 aaPredicted RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 DNAJB12Q9NXW2 375 aaKnown RBP7.45□□□□□ -1.22
RNU6-560P-201ENST00000364007 NEFLP07196 543 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 ADH6P28332 368 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 PLAURQ03405 335 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 WHAMMQ8TF30 809 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 TNFRSF25Q93038 417 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 BCL2L13Q9BXK5 485 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 RNF19AQ9NV58 838 aa7.44□□□□□ -1.22
RNU6-560P-201ENST00000364007 PHF20L1A8MW92 1017 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 LDHBP07195 334 aaKnown RBP7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 COL19A1Q14993 1142 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 TRPM4Q8TD43 1214 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 GIPC2Q8TF65 315 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 MDFIQ99750 246 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 DNAJC25Q9H1X3 360 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 SALL4Q9UJQ4 1053 aa7.43□□□□□ -1.22
RNU6-560P-201ENST00000364007 AMOTL2Q9Y2J4 779 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms