RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 ITGA6P23229 1130 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 DBNDD2Q9BQY9 259 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 AKAP2Q9Y2D5 859 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 CNTNAP4Q9C0A0 1308 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 UBN2Q6ZU65 1347 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 TJP1Q07157 1748 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 CSF1RP07333 972 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 RABEP1Q15276 862 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 BICDL1Q6ZP65 573 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
SRPK1-202ENST00000361690 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 DBNLQ9UJU6 430 aaKnown RBP12.2□□□□□ -0.46
SRPK1-202ENST00000361690 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
SRPK1-202ENST00000361690 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 ATG9AQ7Z3C6 839 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
SRPK1-202ENST00000361690 GPR108Q9NPR9 543 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 NPHP1O15259 732 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 GREM2Q9H772 168 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 SPRYD3Q8NCJ5 442 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 AK7Q96M32 723 aa12.19□□□□□ -0.46
SRPK1-202ENST00000361690 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
SRPK1-202ENST00000361690 ATP5JP18859 108 aa12.18□□□□□ -0.46
SRPK1-202ENST00000361690 TIMM10P62072 90 aa12.18□□□□□ -0.46
SRPK1-202ENST00000361690 ZNF772Q68DY9 489 aaPredicted RBP12.18□□□□□ -0.46
SRPK1-202ENST00000361690 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
SRPK1-202ENST00000361690 CCDC158Q5M9N0 1113 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 KCNJ4P48050 445 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 SGSM2O43147 1006 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 ST18O60284 1047 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 NBR1Q14596 966 aa12.17□□□□□ -0.46
SRPK1-202ENST00000361690 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 TTC39AQ5SRH9 613 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 SNX21Q969T3 373 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 PHF14O94880 888 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 RFC4P35249 363 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
SRPK1-202ENST00000361690 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 NARFQ9UHQ1 456 aa12.16□□□□□ -0.46
SRPK1-202ENST00000361690 IGHMBP2P38935 993 aaKnown RBP12.15□□□□□ -0.46
SRPK1-202ENST00000361690 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
SRPK1-202ENST00000361690 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
SRPK1-202ENST00000361690 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
SRPK1-202ENST00000361690 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
SRPK1-202ENST00000361690 TRIM37O94972 964 aa12.15□□□□□ -0.46
SRPK1-202ENST00000361690 KIF2CQ99661 725 aa12.15□□□□□ -0.46
SRPK1-202ENST00000361690 NYXQ9GZU5 481 aa12.14□□□□□ -0.47
SRPK1-202ENST00000361690 SRP68Q9UHB9 627 aaKnown RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 NTSR2O95665 410 aa12.14□□□□□ -0.47
SRPK1-202ENST00000361690 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 HAUS7Q99871 368 aa12.14□□□□□ -0.47
SRPK1-202ENST00000361690 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 HMGB2P26583 209 aaKnown RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 DDX46Q7L014 1031 aaKnown RBP12.14□□□□□ -0.47
SRPK1-202ENST00000361690 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
SRPK1-202ENST00000361690 NUP98P52948 1817 aa12.14□□□□□ -0.47
SRPK1-202ENST00000361690 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 GOLIM4O00461 696 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 CDC5LQ99459 802 aaKnown RBP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 ANAPC15P60006 121 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 RGL2O15211 777 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
SRPK1-202ENST00000361690 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
SRPK1-202ENST00000361690 NEK4P51957 841 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 PAG1Q9NWQ8 432 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 RAD50Q92878 1312 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 FAM227BQ96M60 508 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 BTAF1O14981 1849 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 ZNF609O15014 1411 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 MROH5Q6ZUA9 1318 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
SRPK1-202ENST00000361690 ADORA1P30542 326 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 HELBQ8NG08 1087 aaPredicted RBP12.11□□□□□ -0.47
SRPK1-202ENST00000361690 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 IL25Q9H293 177 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 ANKRD36CQ5JPF3 1778 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms