RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 NLRP10Q86W26 655 aa24.57■■□□□ 1.52
CBWD3-201ENST00000360171 ANP32BQ92688 251 aaKnown RBP24.57■■□□□ 1.52
CBWD3-201ENST00000360171 CCNL1Q9UK58 526 aaPredicted RBP24.57■■□□□ 1.52
CBWD3-201ENST00000360171 CAMTA2O94983 1202 aa24.56■■□□□ 1.52
CBWD3-201ENST00000360171 KLHDC4Q8TBB5 520 aa24.56■■□□□ 1.52
CBWD3-201ENST00000360171 MYH3P11055 1940 aa24.56■■□□□ 1.52
CBWD3-201ENST00000360171 RFX5P48382 616 aaPredicted RBP24.56■■□□□ 1.52
CBWD3-201ENST00000360171 KIF1BPQ96EK5 621 aa24.56■■□□□ 1.52
CBWD3-201ENST00000360171 SCN7AQ01118 1682 aa24.56■■□□□ 1.52
CBWD3-201ENST00000360171 UBN2Q6ZU65 1347 aa24.55■■□□□ 1.52
CBWD3-201ENST00000360171 C4BP0C0L5 1744 aa24.55■■□□□ 1.52
CBWD3-201ENST00000360171 PCCAP05165 728 aaPredicted RBP24.55■■□□□ 1.52
CBWD3-201ENST00000360171 HSP90AB4PQ58FF6 505 aa24.55■■□□□ 1.52
CBWD3-201ENST00000360171 FAM196AQ6ZSG2 479 aa24.55■■□□□ 1.52
CBWD3-201ENST00000360171 NAP1L5Q96NT1 182 aaPredicted RBP24.55■■□□□ 1.52
CBWD3-201ENST00000360171 LMBR1LQ6UX01 489 aa24.54■■□□□ 1.52
CBWD3-201ENST00000360171 IL17RAQ96F46 866 aa24.54■■□□□ 1.52
CBWD3-201ENST00000360171 FAM89AQ96GI7 184 aa24.54■■□□□ 1.52
CBWD3-201ENST00000360171 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-201ENST00000360171 ZNF34Q8IZ26 560 aa24.53■■□□□ 1.52
CBWD3-201ENST00000360171 ANAPC15P60006 121 aa24.53■■□□□ 1.52
CBWD3-201ENST00000360171 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
CBWD3-201ENST00000360171 SYNE4Q8N205 404 aa24.53■■□□□ 1.52
CBWD3-201ENST00000360171 ZBTB38Q8NAP3 1195 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-201ENST00000360171 ZSCAN23Q3MJ62 389 aa24.52■■□□□ 1.52
CBWD3-201ENST00000360171 TSHZ3Q63HK5 1081 aa24.52■■□□□ 1.52
CBWD3-201ENST00000360171 SIL1Q9H173 461 aa24.52■■□□□ 1.52
CBWD3-201ENST00000360171 EPB41L2O43491 1005 aaKnown RBP24.52■■□□□ 1.52
CBWD3-201ENST00000360171 PTPN12Q05209 780 aaKnown RBP24.52■■□□□ 1.52
CBWD3-201ENST00000360171 PKP1Q13835 747 aa24.52■■□□□ 1.52
CBWD3-201ENST00000360171 RC3H1Q5TC82 1133 aaKnown RBP24.52■■□□□ 1.52
CBWD3-201ENST00000360171 ZGPATQ8N5A5 531 aaKnown RBP24.52■■□□□ 1.52
CBWD3-201ENST00000360171 C4AP0C0L4 1744 aa24.51■■□□□ 1.51
CBWD3-201ENST00000360171 FBXO41Q8TF61 875 aa24.51■■□□□ 1.51
CBWD3-201ENST00000360171 COPRSQ9NQ92 184 aa24.51■■□□□ 1.51
CBWD3-201ENST00000360171 ZDHHC9Q9Y397 364 aa24.51■■□□□ 1.51
CBWD3-201ENST00000360171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.51■■□□□ 1.51
CBWD3-201ENST00000360171 SASH1O94885 1247 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 TRIM37O94972 964 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 MX1P20591 662 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 HS1BP3Q53T59 392 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 NUTM1Q86Y26 1132 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 ESYT1Q9BSJ8 1104 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 CDHR2Q9BYE9 1310 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 CAVIN1Q6NZI2 390 aaKnown RBP24.5■■□□□ 1.51
CBWD3-201ENST00000360171 RGS17Q9UGC6 210 aaPredicted RBP24.5■■□□□ 1.51
CBWD3-201ENST00000360171 STAP2Q9UGK3 403 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 CHMP3Q9Y3E7 222 aa24.5■■□□□ 1.51
CBWD3-201ENST00000360171 AOX1Q06278 1338 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 MCCP23508 829 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 G3BP1Q13283 466 aaKnown RBP eCLIP24.49■■□□□ 1.51
CBWD3-201ENST00000360171 ERC1Q8IUD2 1116 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 CUL4AQ13619 759 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 ZSCAN30Q86W11 494 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 PLA2G12BQ9BX93 195 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 LRRC4BQ9NT99 713 aa24.49■■□□□ 1.51
CBWD3-201ENST00000360171 DDX60Q8IY21 1712 aaKnown RBP24.48■■□□□ 1.51
CBWD3-201ENST00000360171 GNPATO15228 680 aa24.48■■□□□ 1.51
CBWD3-201ENST00000360171 RPS6KA4O75676 772 aa24.48■■□□□ 1.51
CBWD3-201ENST00000360171 AMIGO3Q86WK7 504 aa24.48■■□□□ 1.51
CBWD3-201ENST00000360171 UBE2Q2Q8WVN8 375 aa24.48■■□□□ 1.51
CBWD3-201ENST00000360171 INTS4Q96HW7 963 aaKnown RBP24.47■■□□□ 1.51
CBWD3-201ENST00000360171 TRMT112Q9UI30 125 aaKnown RBP24.47■■□□□ 1.51
CBWD3-201ENST00000360171 LAMB2P55268 1798 aa24.47■■□□□ 1.51
CBWD3-201ENST00000360171 RXRBP28702 533 aa24.47■■□□□ 1.51
CBWD3-201ENST00000360171 UBR3Q6ZT12 1888 aa24.46■■□□□ 1.51
CBWD3-201ENST00000360171 SUSD4Q5VX71 490 aa24.46■■□□□ 1.51
CBWD3-201ENST00000360171 TMX3Q96JJ7 454 aa24.46■■□□□ 1.51
CBWD3-201ENST00000360171 NEK4P51957 841 aa24.46■■□□□ 1.51
CBWD3-201ENST00000360171 PRPF40AO75400 957 aaKnown RBP24.44■■□□□ 1.5
CBWD3-201ENST00000360171 MBD3O95983 291 aa24.44■■□□□ 1.5
CBWD3-201ENST00000360171 CLASRPQ8N2M8 674 aaKnown RBP24.44■■□□□ 1.5
CBWD3-201ENST00000360171 GPT2Q8TD30 523 aa24.44■■□□□ 1.5
CBWD3-201ENST00000360171 PDLIM2Q96JY6 352 aa24.44■■□□□ 1.5
CBWD3-201ENST00000360171 CASZ1Q86V15 1759 aa24.44■■□□□ 1.5
CBWD3-201ENST00000360171 CHMLP26374 656 aa24.44■■□□□ 1.5
CBWD3-201ENST00000360171 NIP7Q9Y221 180 aaKnown RBP eCLIP24.44■■□□□ 1.5
CBWD3-201ENST00000360171 IRS4O14654 1257 aaPredicted RBP24.43■■□□□ 1.5
CBWD3-201ENST00000360171 CSF1RP07333 972 aa24.43■■□□□ 1.5
CBWD3-201ENST00000360171 NCLP19338 710 aaKnown RBP24.43■■□□□ 1.5
CBWD3-201ENST00000360171 BRD1O95696 1058 aa24.43■■□□□ 1.5
CBWD3-201ENST00000360171 POTEAQ6S8J7 498 aa24.43■■□□□ 1.5
CBWD3-201ENST00000360171 ZNF594Q96JF6 807 aaPredicted RBP24.43■■□□□ 1.5
CBWD3-201ENST00000360171 CCDC85AQ96PX6 553 aaPredicted RBP24.43■■□□□ 1.5
CBWD3-201ENST00000360171 BCL2L12Q9HB09 334 aa24.43■■□□□ 1.5
CBWD3-201ENST00000360171 ZNF652Q9Y2D9 606 aa24.43■■□□□ 1.5
CBWD3-201ENST00000360171 FAM177BA6PVY3 158 aa24.42■■□□□ 1.5
CBWD3-201ENST00000360171 PARP10Q53GL7 1025 aa24.42■■□□□ 1.5
CBWD3-201ENST00000360171 CLEC4GQ6UXB4 293 aa24.42■■□□□ 1.5
CBWD3-201ENST00000360171 SRP68Q9UHB9 627 aaKnown RBP24.42■■□□□ 1.5
CBWD3-201ENST00000360171 RTCBQ9Y3I0 505 aaKnown RBP24.42■■□□□ 1.5
CBWD3-201ENST00000360171 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
CBWD3-201ENST00000360171 PI4K2BQ8TCG2 481 aa24.42■■□□□ 1.5
CBWD3-201ENST00000360171 EAF2Q96CJ1 260 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-201ENST00000360171 USP42Q9H9J4 1324 aaKnown RBP24.41■■□□□ 1.5
CBWD3-201ENST00000360171 NTSR2O95665 410 aa24.41■■□□□ 1.5
CBWD3-201ENST00000360171 AACSQ86V21 672 aa24.41■■□□□ 1.5
CBWD3-201ENST00000360171 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
CBWD3-201ENST00000360171 TNS1Q9HBL0 1735 aaKnown RBP24.41■■□□□ 1.5
CBWD3-201ENST00000360171 CTSWP56202 376 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms