RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 PSMD1Q99460 953 aa21.7■■□□□ 1.06
FAM3D-201ENST00000358781 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
FAM3D-201ENST00000358781 GCKRQ14397 625 aa21.69■■□□□ 1.06
FAM3D-201ENST00000358781 MRPL50Q8N5N7 158 aaKnown RBP21.69■■□□□ 1.06
FAM3D-201ENST00000358781 TMX4Q9H1E5 349 aaPredicted RBP21.69■■□□□ 1.06
FAM3D-201ENST00000358781 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
FAM3D-201ENST00000358781 H7C1W4 665 aa21.68■■□□□ 1.06
FAM3D-201ENST00000358781 HNRNPUQ00839 825 aaKnown RBP eCLIP21.68■■□□□ 1.06
FAM3D-201ENST00000358781 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
FAM3D-201ENST00000358781 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
FAM3D-201ENST00000358781 CT47B1P0C2W7 299 aaPredicted RBP21.67■■□□□ 1.06
FAM3D-201ENST00000358781 BEND3Q5T5X7 828 aa21.67■■□□□ 1.06
FAM3D-201ENST00000358781 UBE3BQ7Z3V4 1068 aa21.67■■□□□ 1.06
FAM3D-201ENST00000358781 TMC4Q7Z404 712 aa21.67■■□□□ 1.06
FAM3D-201ENST00000358781 MYH3P11055 1940 aa21.67■■□□□ 1.06
FAM3D-201ENST00000358781 IARSP41252 1262 aaKnown RBP21.66■■□□□ 1.06
FAM3D-201ENST00000358781 ALDH1L2Q3SY69 923 aa21.66■■□□□ 1.06
FAM3D-201ENST00000358781 CCDC152Q4G0S7 254 aa21.66■■□□□ 1.06
FAM3D-201ENST00000358781 CELF1Q92879 486 aaKnown RBP21.66■■□□□ 1.06
FAM3D-201ENST00000358781 COL4A1P02462 1669 aa21.66■■□□□ 1.06
FAM3D-201ENST00000358781 GLTPD2A6NH11 291 aa21.65■■□□□ 1.06
FAM3D-201ENST00000358781 CTSWP56202 376 aa21.65■■□□□ 1.06
FAM3D-201ENST00000358781 NMRK2Q9NPI5 230 aa21.65■■□□□ 1.06
FAM3D-201ENST00000358781 LRRC37AA6NMS7 1700 aa21.65■■□□□ 1.06
FAM3D-201ENST00000358781 KIF3CO14782 793 aa21.64■■□□□ 1.05
FAM3D-201ENST00000358781 CASP7P55210 303 aa21.64■■□□□ 1.05
FAM3D-201ENST00000358781 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
FAM3D-201ENST00000358781 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
FAM3D-201ENST00000358781 PTPRCP08575 1304 aa21.64■■□□□ 1.05
FAM3D-201ENST00000358781 RPS8P62241 208 aaKnown RBP21.63■■□□□ 1.05
FAM3D-201ENST00000358781 SMC4Q9NTJ3 1288 aa21.63■■□□□ 1.05
FAM3D-201ENST00000358781 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
FAM3D-201ENST00000358781 SLC4A10Q6U841 1118 aa21.62■■□□□ 1.05
FAM3D-201ENST00000358781 DPP8Q6V1X1 898 aaPredicted RBP21.62■■□□□ 1.05
FAM3D-201ENST00000358781 MPNDQ8N594 471 aa21.62■■□□□ 1.05
FAM3D-201ENST00000358781 TTLL11Q8NHH1 800 aa21.62■■□□□ 1.05
FAM3D-201ENST00000358781 CCDC85AQ96PX6 553 aaPredicted RBP21.62■■□□□ 1.05
FAM3D-201ENST00000358781 PLA2G12BQ9BX93 195 aa21.62■■□□□ 1.05
FAM3D-201ENST00000358781 RTFDC1Q9BY42 306 aaPredicted RBP21.62■■□□□ 1.05
FAM3D-201ENST00000358781 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
FAM3D-201ENST00000358781 C1QTNF8P60827 252 aa21.61■■□□□ 1.05
FAM3D-201ENST00000358781 SUPT20HQ8NEM7 779 aa21.6■■□□□ 1.05
FAM3D-201ENST00000358781 SRCIN1Q9C0H9 1055 aa21.6■■□□□ 1.05
FAM3D-201ENST00000358781 RRAGCQ9HB90 399 aa21.6■■□□□ 1.05
FAM3D-201ENST00000358781 RTL9Q8NET4 1388 aa21.6■■□□□ 1.05
FAM3D-201ENST00000358781 COL4A5P29400 1685 aa21.6■■□□□ 1.05
FAM3D-201ENST00000358781 LARGE2Q8N3Y3 721 aa21.59■■□□□ 1.05
FAM3D-201ENST00000358781 JDP2Q8WYK2 163 aa21.59■■□□□ 1.05
FAM3D-201ENST00000358781 VPS33BQ9H267 617 aa21.59■■□□□ 1.05
FAM3D-201ENST00000358781 GREM2Q9H772 168 aa21.59■■□□□ 1.05
FAM3D-201ENST00000358781 WDR90Q96KV7 1748 aa21.59■■□□□ 1.05
FAM3D-201ENST00000358781 FZD9O00144 591 aa21.58■■□□□ 1.05
FAM3D-201ENST00000358781 GRM8O00222 908 aa21.58■■□□□ 1.05
FAM3D-201ENST00000358781 CDC5LQ99459 802 aaKnown RBP21.58■■□□□ 1.05
FAM3D-201ENST00000358781 DUOX1Q9NRD9 1551 aa21.58■■□□□ 1.04
FAM3D-201ENST00000358781 ZNF541Q9H0D2 1346 aa21.57■■□□□ 1.04
FAM3D-201ENST00000358781 PPIP5K2O43314 1243 aa21.57■■□□□ 1.04
FAM3D-201ENST00000358781 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
FAM3D-201ENST00000358781 BRPF1P55201 1214 aaPredicted RBP21.57■■□□□ 1.04
FAM3D-201ENST00000358781 AOC3Q16853 763 aa21.57■■□□□ 1.04
FAM3D-201ENST00000358781 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
FAM3D-201ENST00000358781 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
FAM3D-201ENST00000358781 DDNO94850 711 aaPredicted RBP21.56■■□□□ 1.04
FAM3D-201ENST00000358781 CSF1RP07333 972 aa21.56■■□□□ 1.04
FAM3D-201ENST00000358781 GPSM2P81274 684 aa21.56■■□□□ 1.04
FAM3D-201ENST00000358781 C9orf78Q9NZ63 289 aaPredicted RBP21.56■■□□□ 1.04
FAM3D-201ENST00000358781 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
FAM3D-201ENST00000358781 LTBP1Q14766 1721 aa21.56■■□□□ 1.04
FAM3D-201ENST00000358781 VEGFAP15692 232 aaPredicted RBP21.55■■□□□ 1.04
FAM3D-201ENST00000358781 SPEF2Q9C093 1822 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 POTECB2RU33 542 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 TOMM70O94826 608 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 FOXO4P98177 505 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 KIAA2012Q0VF49 1180 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 FAM161AQ3B820 660 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 NIM1KQ8IY84 436 aa21.55■■□□□ 1.04
FAM3D-201ENST00000358781 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
FAM3D-201ENST00000358781 PODXL2Q9NZ53 605 aa21.54■■□□□ 1.04
FAM3D-201ENST00000358781 POLLQ9UGP5 575 aa21.54■■□□□ 1.04
FAM3D-201ENST00000358781 NOB1Q9ULX3 412 aaKnown RBP21.54■■□□□ 1.04
FAM3D-201ENST00000358781 UTYO14607 1347 aa21.53■■□□□ 1.04
FAM3D-201ENST00000358781 ITGA6P23229 1130 aa21.53■■□□□ 1.04
FAM3D-201ENST00000358781 EIF6P56537 245 aaKnown RBP21.53■■□□□ 1.04
FAM3D-201ENST00000358781 L3MBTL3Q96JM7 780 aaPredicted RBP21.53■■□□□ 1.04
FAM3D-201ENST00000358781 BSDC1Q9NW68 430 aaPredicted RBP21.53■■□□□ 1.04
FAM3D-201ENST00000358781 C6orf229H3BNL8 230 aa21.52■■□□□ 1.03
FAM3D-201ENST00000358781 EPHA10Q5JZY3 1008 aa21.52■■□□□ 1.03
FAM3D-201ENST00000358781 GPC2Q8N158 579 aa21.52■■□□□ 1.03
FAM3D-201ENST00000358781 TBC1D16Q8TBP0 767 aa21.52■■□□□ 1.03
FAM3D-201ENST00000358781 ANKIB1Q9P2G1 1089 aa21.52■■□□□ 1.03
FAM3D-201ENST00000358781 NBPF7P0C2Y1 421 aaPredicted RBP21.51■■□□□ 1.03
FAM3D-201ENST00000358781 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
FAM3D-201ENST00000358781 WASHC4Q2M389 1173 aa21.51■■□□□ 1.03
FAM3D-201ENST00000358781 RBM46Q8TBY0 533 aaKnown RBP21.51■■□□□ 1.03
FAM3D-201ENST00000358781 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
FAM3D-201ENST00000358781 ZNRF3Q9ULT6 936 aa21.51■■□□□ 1.03
FAM3D-201ENST00000358781 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
FAM3D-201ENST00000358781 SCN4AP35499 1836 aa21.5■■□□□ 1.03
FAM3D-201ENST00000358781 LMBR1LQ6UX01 489 aa21.5■■□□□ 1.03
FAM3D-201ENST00000358781 EYA3Q99504 573 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms