RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 TMC4Q7Z404 712 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 MPNDQ8N594 471 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
FAM3B-201ENST00000357985 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
FAM3B-201ENST00000357985 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
FAM3B-201ENST00000357985 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
FAM3B-201ENST00000357985 ADARB2Q9NS39 739 aaKnown RBP17.41■□□□□ 0.38
FAM3B-201ENST00000357985 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
FAM3B-201ENST00000357985 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
FAM3B-201ENST00000357985 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
FAM3B-201ENST00000357985 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
FAM3B-201ENST00000357985 WBP1LQ9NX94 342 aa17.39■□□□□ 0.37
FAM3B-201ENST00000357985 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
FAM3B-201ENST00000357985 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
FAM3B-201ENST00000357985 ECE1P42892 770 aa17.38■□□□□ 0.37
FAM3B-201ENST00000357985 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
FAM3B-201ENST00000357985 CXCL9Q07325 125 aa17.38■□□□□ 0.37
FAM3B-201ENST00000357985 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
FAM3B-201ENST00000357985 PSME4Q14997 1843 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 GMPSP49915 693 aaPredicted RBP17.37■□□□□ 0.37
FAM3B-201ENST00000357985 TNIP1Q15025 636 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 MYH3P11055 1940 aa17.37■□□□□ 0.37
FAM3B-201ENST00000357985 COL4A1P02462 1669 aa17.36■□□□□ 0.37
FAM3B-201ENST00000357985 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
FAM3B-201ENST00000357985 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
FAM3B-201ENST00000357985 TRAF5O00463 557 aa17.35■□□□□ 0.37
FAM3B-201ENST00000357985 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
FAM3B-201ENST00000357985 CAPNS2Q96L46 248 aa17.35■□□□□ 0.37
FAM3B-201ENST00000357985 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
FAM3B-201ENST00000357985 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
FAM3B-201ENST00000357985 RAD17O75943 681 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 HSPA8P11142 646 aaKnown RBP17.34■□□□□ 0.37
FAM3B-201ENST00000357985 LBX1P52954 281 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 CALD1Q05682 793 aaKnown RBP17.34■□□□□ 0.37
FAM3B-201ENST00000357985 FMR1Q06787 632 aaKnown RBP eCLIP17.34■□□□□ 0.37
FAM3B-201ENST00000357985 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
FAM3B-201ENST00000357985 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 TLL2Q9Y6L7 1015 aa17.34■□□□□ 0.37
FAM3B-201ENST00000357985 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
FAM3B-201ENST00000357985 GRM1Q13255 1194 aa17.33■□□□□ 0.36
FAM3B-201ENST00000357985 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
FAM3B-201ENST00000357985 BEGAINQ9BUH8 593 aa17.33■□□□□ 0.36
FAM3B-201ENST00000357985 SCN9AQ15858 1988 aa17.32■□□□□ 0.36
FAM3B-201ENST00000357985 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
FAM3B-201ENST00000357985 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
FAM3B-201ENST00000357985 ZC3H15Q8WU90 426 aaKnown RBP17.32■□□□□ 0.36
FAM3B-201ENST00000357985 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
FAM3B-201ENST00000357985 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
FAM3B-201ENST00000357985 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 H7C1D1 291 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 CELF2O95319 508 aaKnown RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 GNAI1P63096 354 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 TRIM28Q13263 835 aaKnown RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 CST9Q5W186 159 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 EYA3Q99504 573 aa17.31■□□□□ 0.36
FAM3B-201ENST00000357985 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
FAM3B-201ENST00000357985 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
FAM3B-201ENST00000357985 MICALL2Q8IY33 904 aa17.3■□□□□ 0.36
FAM3B-201ENST00000357985 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
FAM3B-201ENST00000357985 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
FAM3B-201ENST00000357985 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
FAM3B-201ENST00000357985 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 ZNF853P0CG23 659 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
FAM3B-201ENST00000357985 DPF2Q92785 391 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
FAM3B-201ENST00000357985 PSMD14O00487 310 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 ECE2O60344 883 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 RPS12P25398 132 aaKnown RBP17.28■□□□□ 0.36
FAM3B-201ENST00000357985 GPSM2P81274 684 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 SAPCD2Q86UD0 394 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
FAM3B-201ENST00000357985 APAF1O14727 1248 aa17.27■□□□□ 0.36
FAM3B-201ENST00000357985 RIMBP2O15034 1052 aa17.27■□□□□ 0.36
FAM3B-201ENST00000357985 MAP2K2P36507 400 aa17.27■□□□□ 0.36
FAM3B-201ENST00000357985 HIRAP54198 1017 aaPredicted RBP17.27■□□□□ 0.36
FAM3B-201ENST00000357985 MYD88Q99836 296 aa17.27■□□□□ 0.36
FAM3B-201ENST00000357985 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
FAM3B-201ENST00000357985 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
FAM3B-201ENST00000357985 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
FAM3B-201ENST00000357985 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
FAM3B-201ENST00000357985 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
FAM3B-201ENST00000357985 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms