RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PUS3Q9BZE2 481 aaKnown RBP31.18■■■□□ 2.58
CLK2-201ENST00000355560 ATRNO75882 1429 aa31.18■■■□□ 2.58
CLK2-201ENST00000355560 GPR108Q9NPR9 543 aa31.18■■■□□ 2.58
CLK2-201ENST00000355560 ATP5JP18859 108 aa31.17■■■□□ 2.58
CLK2-201ENST00000355560 CTSWP56202 376 aa31.17■■■□□ 2.58
CLK2-201ENST00000355560 EPB41L2O43491 1005 aaKnown RBP31.16■■■□□ 2.58
CLK2-201ENST00000355560 KCNQ4P56696 695 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 TAF7LQ5H9L4 462 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 TTLL11Q8NHH1 800 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 TRPC5Q9UL62 973 aaPredicted RBP31.16■■■□□ 2.58
CLK2-201ENST00000355560 ZNF609O15014 1411 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 K7ELQ4 463 aaPredicted RBP31.16■■■□□ 2.58
CLK2-201ENST00000355560 RUFY2Q8WXA3 655 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 FBXO3Q9UK99 471 aa31.16■■■□□ 2.58
CLK2-201ENST00000355560 NEUROD6Q96NK8 337 aa31.14■■■□□ 2.58
CLK2-201ENST00000355560 GREM2Q9H772 168 aa31.14■■■□□ 2.58
CLK2-201ENST00000355560 BCORQ6W2J9 1755 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 PDE8AO60658 829 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 FSD1Q9BTV5 496 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 RAD50Q92878 1312 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 ITGA6P23229 1130 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 SUSD4Q5VX71 490 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 PALD1Q9ULE6 856 aa31.13■■■□□ 2.57
CLK2-201ENST00000355560 HIP1O00291 1037 aa31.12■■■□□ 2.57
CLK2-201ENST00000355560 CEP126Q9P2H0 1117 aa31.12■■■□□ 2.57
CLK2-201ENST00000355560 CNTNAP4Q9C0A0 1308 aa31.12■■■□□ 2.57
CLK2-201ENST00000355560 ANAPC15P60006 121 aa31.12■■■□□ 2.57
CLK2-201ENST00000355560 TIMM10P62072 90 aa31.12■■■□□ 2.57
CLK2-201ENST00000355560 ONECUT3O60422 494 aaPredicted RBP31.11■■■□□ 2.57
CLK2-201ENST00000355560 KIAA1211Q6ZU35 1233 aa31.11■■■□□ 2.57
CLK2-201ENST00000355560 LSG1Q9H089 658 aaKnown RBP31.11■■■□□ 2.57
CLK2-201ENST00000355560 SH3TC1Q8TE82 1336 aa31.11■■■□□ 2.57
CLK2-201ENST00000355560 A0A1B0GUL7 405 aa31.1■■■□□ 2.57
CLK2-201ENST00000355560 ST18O60284 1047 aa31.1■■■□□ 2.57
CLK2-201ENST00000355560 PARP10Q53GL7 1025 aa31.1■■■□□ 2.57
CLK2-201ENST00000355560 EDC3Q96F86 508 aaKnown RBP31.1■■■□□ 2.57
CLK2-201ENST00000355560 FAM177BA6PVY3 158 aa31.1■■■□□ 2.57
CLK2-201ENST00000355560 UTP14AQ9BVJ6 771 aaKnown RBP31.1■■■□□ 2.57
CLK2-201ENST00000355560 NIP7Q9Y221 180 aaKnown RBP eCLIP31.1■■■□□ 2.57
CLK2-201ENST00000355560 SBF2Q86WG5 1849 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 ANKRD18BA2A2Z9 1011 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 HSPA4P34932 840 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 NFKBIBQ15653 356 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 SEPT12Q8IYM1 358 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 ZNF652Q9Y2D9 606 aa31.09■■■□□ 2.57
CLK2-201ENST00000355560 DNAJC2Q99543 621 aaKnown RBP31.09■■■□□ 2.57
CLK2-201ENST00000355560 HAUS7Q99871 368 aa31.08■■■□□ 2.57
CLK2-201ENST00000355560 NDUFB9Q9Y6M9 179 aa31.08■■■□□ 2.57
CLK2-201ENST00000355560 NMIQ13287 307 aaPredicted RBP31.07■■■□□ 2.56
CLK2-201ENST00000355560 AK7Q96M32 723 aa31.07■■■□□ 2.56
CLK2-201ENST00000355560 FAM227BQ96M60 508 aa31.07■■■□□ 2.56
CLK2-201ENST00000355560 HSP90AA1P07900 732 aaKnown RBP31.07■■■□□ 2.56
CLK2-201ENST00000355560 LDHAL6AQ6ZMR3 332 aa31.06■■■□□ 2.56
CLK2-201ENST00000355560 RIC1Q4ADV7 1423 aa31.06■■■□□ 2.56
CLK2-201ENST00000355560 IL17RAQ96F46 866 aa31.06■■■□□ 2.56
CLK2-201ENST00000355560 CCNL1Q9UK58 526 aaPredicted RBP31.06■■■□□ 2.56
CLK2-201ENST00000355560 AKAP2Q9Y2D5 859 aa31.06■■■□□ 2.56
CLK2-201ENST00000355560 HCLS1P14317 486 aaPredicted RBP31.05■■■□□ 2.56
CLK2-201ENST00000355560 CLEC4GQ6UXB4 293 aa31.04■■■□□ 2.56
CLK2-201ENST00000355560 LY75O60449 1722 aa31.04■■■□□ 2.56
CLK2-201ENST00000355560 DDX60Q8IY21 1712 aaKnown RBP31.04■■■□□ 2.56
CLK2-201ENST00000355560 NTSR2O95665 410 aa31.04■■■□□ 2.56
CLK2-201ENST00000355560 QTRT2Q9H974 415 aaKnown RBP31.04■■■□□ 2.56
CLK2-201ENST00000355560 RIPOR2Q9Y4F9 1068 aa31.04■■■□□ 2.56
CLK2-201ENST00000355560 A0A0D9SFI3 127 aa31.03■■■□□ 2.56
CLK2-201ENST00000355560 NEK4P51957 841 aa31.03■■■□□ 2.56
CLK2-201ENST00000355560 CHMP5Q9NZZ3 219 aa31.03■■■□□ 2.56
CLK2-201ENST00000355560 SCN7AQ01118 1682 aa31.03■■■□□ 2.56
CLK2-201ENST00000355560 RC3H1Q5TC82 1133 aaKnown RBP31.03■■■□□ 2.56
CLK2-201ENST00000355560 CNNM1Q9NRU3 951 aa31.03■■■□□ 2.56
CLK2-201ENST00000355560 RFX7Q2KHR2 1363 aa31.02■■■□□ 2.56
CLK2-201ENST00000355560 LAMB2P55268 1798 aa31.02■■■□□ 2.56
CLK2-201ENST00000355560 METTL24Q5JXM2 366 aa31.02■■■□□ 2.56
CLK2-201ENST00000355560 LRP5O75197 1615 aa31.01■■■□□ 2.56
CLK2-201ENST00000355560 DDX46Q7L014 1031 aaKnown RBP31.01■■■□□ 2.56
CLK2-201ENST00000355560 DDIT3P35638 169 aa31.01■■■□□ 2.55
CLK2-201ENST00000355560 PTH1RQ03431 593 aa31.01■■■□□ 2.55
CLK2-201ENST00000355560 CCDC171Q6TFL3 1326 aa31■■■□□ 2.55
CLK2-201ENST00000355560 SNRKQ9NRH2 765 aa31■■■□□ 2.55
CLK2-201ENST00000355560 FOXD4L1Q9NU39 408 aa31■■■□□ 2.55
CLK2-201ENST00000355560 TAF1LQ8IZX4 1826 aa31■■■□□ 2.55
CLK2-201ENST00000355560 SMIM5Q71RC9 77 aa31■■■□□ 2.55
CLK2-201ENST00000355560 GNPATO15228 680 aa30.99■■■□□ 2.55
CLK2-201ENST00000355560 RPS6KA4O75676 772 aa30.99■■■□□ 2.55
CLK2-201ENST00000355560 XAGE2Q96GT9 111 aa30.99■■■□□ 2.55
CLK2-201ENST00000355560 MED23Q9ULK4 1368 aa30.99■■■□□ 2.55
CLK2-201ENST00000355560 IFIT1P09914 478 aaKnown RBP30.98■■■□□ 2.55
CLK2-201ENST00000355560 ADORA1P30542 326 aa30.98■■■□□ 2.55
CLK2-201ENST00000355560 PAG1Q9NWQ8 432 aa30.98■■■□□ 2.55
CLK2-201ENST00000355560 FRAT2O75474 233 aaPredicted RBP30.98■■■□□ 2.55
CLK2-201ENST00000355560 HSP90B1P14625 803 aaKnown RBP30.98■■■□□ 2.55
CLK2-201ENST00000355560 GORABQ5T7V8 394 aa30.98■■■□□ 2.55
CLK2-201ENST00000355560 KBTBD3Q8NAB2 608 aa30.98■■■□□ 2.55
CLK2-201ENST00000355560 SNX14Q9Y5W7 946 aa30.98■■■□□ 2.55
CLK2-201ENST00000355560 GOLIM4O00461 696 aa30.97■■■□□ 2.55
CLK2-201ENST00000355560 CCDC158Q5M9N0 1113 aa30.97■■■□□ 2.55
CLK2-201ENST00000355560 ATP2B3Q16720 1220 aa30.97■■■□□ 2.55
CLK2-201ENST00000355560 UPF3BQ9BZI7 483 aaKnown RBP30.97■■■□□ 2.55
CLK2-201ENST00000355560 VGLL2Q8N8G2 317 aa30.96■■■□□ 2.55
CLK2-201ENST00000355560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms