RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
PDGFA-201ENST00000354513 CFAP44Q96MT7 982 aa20.71■□□□□ 0.91
PDGFA-201ENST00000354513 MYH3P11055 1940 aa20.7■□□□□ 0.9
PDGFA-201ENST00000354513 ZNF646O15015 1829 aaPredicted RBP20.7■□□□□ 0.9
PDGFA-201ENST00000354513 FOXN1O15353 648 aa20.7■□□□□ 0.9
PDGFA-201ENST00000354513 CXCL9Q07325 125 aa20.7■□□□□ 0.9
PDGFA-201ENST00000354513 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
PDGFA-201ENST00000354513 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
PDGFA-201ENST00000354513 BBOX1O75936 387 aa20.69■□□□□ 0.9
PDGFA-201ENST00000354513 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
PDGFA-201ENST00000354513 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
PDGFA-201ENST00000354513 LMOD1P29536 600 aaPredicted RBP20.68■□□□□ 0.9
PDGFA-201ENST00000354513 KIAA2012Q0VF49 1180 aa20.68■□□□□ 0.9
PDGFA-201ENST00000354513 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
PDGFA-201ENST00000354513 ANKRD13DQ6ZTN6 518 aa20.68■□□□□ 0.9
PDGFA-201ENST00000354513 GPRC5DQ9NZD1 345 aa20.68■□□□□ 0.9
PDGFA-201ENST00000354513 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
PDGFA-201ENST00000354513 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
PDGFA-201ENST00000354513 YDJCA8MPS7 323 aa20.67■□□□□ 0.9
PDGFA-201ENST00000354513 DDX46Q7L014 1031 aaKnown RBP20.67■□□□□ 0.9
PDGFA-201ENST00000354513 MPNDQ8N594 471 aa20.67■□□□□ 0.9
PDGFA-201ENST00000354513 SUPT20HQ8NEM7 779 aa20.67■□□□□ 0.9
PDGFA-201ENST00000354513 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
PDGFA-201ENST00000354513 POLR2AP24928 1970 aaKnown RBP20.67■□□□□ 0.9
PDGFA-201ENST00000354513 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
PDGFA-201ENST00000354513 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
PDGFA-201ENST00000354513 TRAF5O00463 557 aa20.65■□□□□ 0.9
PDGFA-201ENST00000354513 APAF1O14727 1248 aa20.65■□□□□ 0.9
PDGFA-201ENST00000354513 GMPSP49915 693 aaPredicted RBP20.65■□□□□ 0.9
PDGFA-201ENST00000354513 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
PDGFA-201ENST00000354513 SHTN1A0MZ66 631 aa20.64■□□□□ 0.89
PDGFA-201ENST00000354513 CAPN15O75808 1086 aa20.64■□□□□ 0.89
PDGFA-201ENST00000354513 CST9Q5W186 159 aa20.64■□□□□ 0.89
PDGFA-201ENST00000354513 PHAXQ9H814 394 aaKnown RBP20.64■□□□□ 0.89
PDGFA-201ENST00000354513 ADARB2Q9NS39 739 aaKnown RBP20.64■□□□□ 0.89
PDGFA-201ENST00000354513 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
PDGFA-201ENST00000354513 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
PDGFA-201ENST00000354513 DEFB115Q30KQ5 88 aa20.63■□□□□ 0.89
PDGFA-201ENST00000354513 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
PDGFA-201ENST00000354513 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
PDGFA-201ENST00000354513 RAD17O75943 681 aa20.62■□□□□ 0.89
PDGFA-201ENST00000354513 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
PDGFA-201ENST00000354513 CIAPIN1Q6FI81 312 aa20.62■□□□□ 0.89
PDGFA-201ENST00000354513 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
PDGFA-201ENST00000354513 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
PDGFA-201ENST00000354513 HIRAP54198 1017 aaPredicted RBP20.61■□□□□ 0.89
PDGFA-201ENST00000354513 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
PDGFA-201ENST00000354513 TMC4Q7Z404 712 aa20.61■□□□□ 0.89
PDGFA-201ENST00000354513 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
PDGFA-201ENST00000354513 TRPM4Q8TD43 1214 aa20.61■□□□□ 0.89
PDGFA-201ENST00000354513 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
PDGFA-201ENST00000354513 GPSM2P81274 684 aa20.6■□□□□ 0.89
PDGFA-201ENST00000354513 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
PDGFA-201ENST00000354513 ABT1Q9ULW3 272 aaKnown RBP20.6■□□□□ 0.89
PDGFA-201ENST00000354513 ELL2O00472 640 aaPredicted RBP20.59■□□□□ 0.89
PDGFA-201ENST00000354513 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
PDGFA-201ENST00000354513 GNAI1P63096 354 aa20.59■□□□□ 0.89
PDGFA-201ENST00000354513 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
PDGFA-201ENST00000354513 POLLQ9UGP5 575 aa20.59■□□□□ 0.89
PDGFA-201ENST00000354513 A0A1B0GUL6 1792 aa20.59■□□□□ 0.89
PDGFA-201ENST00000354513 RTL9Q8NET4 1388 aa20.58■□□□□ 0.89
PDGFA-201ENST00000354513 GPR101Q96P66 508 aaPredicted RBP20.58■□□□□ 0.89
PDGFA-201ENST00000354513 GLIS2Q9BZE0 524 aaPredicted RBP20.58■□□□□ 0.89
PDGFA-201ENST00000354513 HSPA8P11142 646 aaKnown RBP20.57■□□□□ 0.88
PDGFA-201ENST00000354513 MYD88Q99836 296 aa20.57■□□□□ 0.88
PDGFA-201ENST00000354513 DBNDD1Q9H9R9 158 aa20.57■□□□□ 0.88
PDGFA-201ENST00000354513 SEC31BQ9NQW1 1179 aa20.57■□□□□ 0.88
PDGFA-201ENST00000354513 TLL2Q9Y6L7 1015 aa20.57■□□□□ 0.88
PDGFA-201ENST00000354513 CACNA1FO60840 1977 aa20.57■□□□□ 0.88
PDGFA-201ENST00000354513 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
PDGFA-201ENST00000354513 CYP4F22Q6NT55 531 aa20.56■□□□□ 0.88
PDGFA-201ENST00000354513 RIC3Q7Z5B4 369 aa20.56■□□□□ 0.88
PDGFA-201ENST00000354513 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
PDGFA-201ENST00000354513 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
PDGFA-201ENST00000354513 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
PDGFA-201ENST00000354513 ZBTB12Q9Y330 459 aaPredicted RBP20.56■□□□□ 0.88
PDGFA-201ENST00000354513 PSMD14O00487 310 aa20.55■□□□□ 0.88
PDGFA-201ENST00000354513 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
PDGFA-201ENST00000354513 TNIP1Q15025 636 aa20.55■□□□□ 0.88
PDGFA-201ENST00000354513 JARID2Q92833 1246 aaPredicted RBP20.55■□□□□ 0.88
PDGFA-201ENST00000354513 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
PDGFA-201ENST00000354513 KCNQ5Q9NR82 932 aa20.55■□□□□ 0.88
PDGFA-201ENST00000354513 RIMBP2O15034 1052 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 EGFRP00533 1210 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 LBX1P52954 281 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 WASHC4Q2M389 1173 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 MICALL2Q8IY33 904 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 TBC1D16Q8TBP0 767 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 AIDAQ96BJ3 306 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
PDGFA-201ENST00000354513 CNOT7Q9UIV1 285 aaKnown RBP20.54■□□□□ 0.88
PDGFA-201ENST00000354513 PCCAP05165 728 aaPredicted RBP20.53■□□□□ 0.88
PDGFA-201ENST00000354513 RPS8P62241 208 aaKnown RBP20.53■□□□□ 0.88
PDGFA-201ENST00000354513 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 ECE2O60344 883 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
PDGFA-201ENST00000354513 DOK7Q18PE1 504 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 SAPCD2Q86UD0 394 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
PDGFA-201ENST00000354513 ZC3H15Q8WU90 426 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms