RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
SVIP-201ENST00000354193 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
SVIP-201ENST00000354193 JCADQ9P266 1359 aa13.33□□□□□ -0.28
SVIP-201ENST00000354193 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 RRP12Q5JTH9 1297 aaKnown RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 GJD4Q96KN9 370 aaPredicted RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 G3V3G9 751 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
SVIP-201ENST00000354193 AKAP2Q9Y2D5 859 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
SVIP-201ENST00000354193 H7C1W4 665 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
SVIP-201ENST00000354193 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 CHST3Q7LGC8 479 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 GBP4Q96PP9 640 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 THRAP3Q9Y2W1 955 aaKnown RBP13.31□□□□□ -0.28
SVIP-201ENST00000354193 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
SVIP-201ENST00000354193 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 IL25Q9H293 177 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
SVIP-201ENST00000354193 PDE8AO60658 829 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 CTSWP56202 376 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 PTH1RQ03431 593 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 MCTP1Q6DN14 999 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 RAI14Q9P0K7 980 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
SVIP-201ENST00000354193 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
SVIP-201ENST00000354193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
SVIP-201ENST00000354193 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 HIP1O00291 1037 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 SSFA2P28290 1259 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 SGSM2O43147 1006 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
SVIP-201ENST00000354193 FOXO4P98177 505 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
SVIP-201ENST00000354193 APBA3O96018 575 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 ZAP70P43403 619 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 VPS72Q15906 364 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
SVIP-201ENST00000354193 SLC9C2Q5TAH2 1124 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
SVIP-201ENST00000354193 MTX1Q13505 466 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 ERFEQ4G0M1 354 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 DDX11Q96FC9 970 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 CHAMP1Q96JM3 812 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.28
SVIP-201ENST00000354193 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.28
SVIP-201ENST00000354193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
SVIP-201ENST00000354193 SLC5A1P13866 664 aa13.27□□□□□ -0.29
SVIP-201ENST00000354193 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
SVIP-201ENST00000354193 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.29
SVIP-201ENST00000354193 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
SVIP-201ENST00000354193 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
SVIP-201ENST00000354193 FERMT3Q86UX7 667 aa13.27□□□□□ -0.29
SVIP-201ENST00000354193 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.29
SVIP-201ENST00000354193 TMX3Q96JJ7 454 aa13.27□□□□□ -0.29
SVIP-201ENST00000354193 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
SVIP-201ENST00000354193 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
SVIP-201ENST00000354193 ZNF589Q86UQ0 364 aaPredicted RBP13.26□□□□□ -0.29
SVIP-201ENST00000354193 NSFL1CQ9UNZ2 370 aaKnown RBP13.26□□□□□ -0.29
SVIP-201ENST00000354193 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
SVIP-201ENST00000354193 PHKA1P46020 1223 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
SVIP-201ENST00000354193 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
SVIP-201ENST00000354193 TRDNQ13061 729 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 RPGRQ92834 1020 aaKnown RBP13.25□□□□□ -0.29
SVIP-201ENST00000354193 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 BCAMP50895 628 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
SVIP-201ENST00000354193 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms