RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 GDPD2Q9HCC8 539 aa18.45■□□□□ 0.54
TNFSF13-202ENST00000349228 A0A087WZG4 1122 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 ZNF500O60304 480 aaPredicted RBP18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 BRD2P25440 801 aaKnown RBP18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 TAF5LO75529 589 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 CASP7P55210 303 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 UBE3BQ7Z3V4 1068 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
TNFSF13-202ENST00000349228 ERVV-2B6SEH9 535 aa18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 H7C1W4 665 aa18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 TFCP2Q12800 502 aa18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 HAUS7Q99871 368 aa18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 DBNLQ9UJU6 430 aaKnown RBP18.43■□□□□ 0.54
TNFSF13-202ENST00000349228 PARP4Q9UKK3 1724 aaKnown RBP18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 OFD1O75665 1012 aa18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 TERF1P54274 439 aa18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 LARP1BQ659C4 914 aaKnown RBP18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
TNFSF13-202ENST00000349228 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
TNFSF13-202ENST00000349228 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
TNFSF13-202ENST00000349228 TPM2P07951 284 aa18.41■□□□□ 0.54
TNFSF13-202ENST00000349228 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 MCMDC2Q4G0Z9 681 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 ELP1O95163 1332 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 KRT85P78386 507 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
TNFSF13-202ENST00000349228 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 NKX1-1Q15270 411 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 RNF214Q8ND24 703 aa18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 FIBPO43427 364 aa18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 HMGB1P09429 215 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 LMBR1LQ6UX01 489 aa18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 ZNF589Q86UQ0 364 aaPredicted RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
TNFSF13-202ENST00000349228 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 IL15P40933 162 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 FOXO4P98177 505 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 ARFGEF2Q9Y6D5 1785 aa18.38■□□□□ 0.53
TNFSF13-202ENST00000349228 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
TNFSF13-202ENST00000349228 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
TNFSF13-202ENST00000349228 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
TNFSF13-202ENST00000349228 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
TNFSF13-202ENST00000349228 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
TNFSF13-202ENST00000349228 CIAO1O76071 339 aa18.36■□□□□ 0.53
TNFSF13-202ENST00000349228 AFDNP55196 1824 aaKnown RBP18.36■□□□□ 0.53
TNFSF13-202ENST00000349228 GLI3P10071 1580 aa18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 NBPF26B4DH59 902 aa18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 NBPF14Q5TI25 921 aa18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 NBPF10Q6P3W6 841 aaKnown RBP18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 NBPF15Q8N660 670 aa18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 DNAJC2Q99543 621 aaKnown RBP18.35■□□□□ 0.53
TNFSF13-202ENST00000349228 PTMAP06454 111 aaKnown RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 FUCA2Q9BTY2 467 aa18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 ZNF609O15014 1411 aa18.34■□□□□ 0.53
TNFSF13-202ENST00000349228 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.53
TNFSF13-202ENST00000349228 GTF3C6Q969F1 213 aa18.33■□□□□ 0.53
TNFSF13-202ENST00000349228 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.53
TNFSF13-202ENST00000349228 EYA2O00167 538 aa18.33■□□□□ 0.52
TNFSF13-202ENST00000349228 TOM1L2Q6ZVM7 507 aa18.33■□□□□ 0.52
TNFSF13-202ENST00000349228 DHX37Q8IY37 1157 aaKnown RBP18.33■□□□□ 0.52
TNFSF13-202ENST00000349228 CARD10Q9BWT7 1032 aa18.33■□□□□ 0.52
TNFSF13-202ENST00000349228 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
TNFSF13-202ENST00000349228 ZSCAN16Q9H4T2 348 aaPredicted RBP18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 PAG1Q9NWQ8 432 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 CCDC192P0DO97 292 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 CDC37L1Q7L3B6 337 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 KIF3AQ9Y496 699 aa18.32■□□□□ 0.52
TNFSF13-202ENST00000349228 KDM4AO75164 1064 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms