RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TTLL11Q8NHH1 800 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 PI4K2BQ8TCG2 481 aa22.86■■□□□ 1.25
PTN-201ENST00000348225 TFCP2Q12800 502 aa22.85■■□□□ 1.25
PTN-201ENST00000348225 TRAPPC3LQ5T215 181 aa22.85■■□□□ 1.25
PTN-201ENST00000348225 EAF2Q96CJ1 260 aaPredicted RBP22.85■■□□□ 1.25
PTN-201ENST00000348225 DDX60Q8IY21 1712 aaKnown RBP22.84■■□□□ 1.25
PTN-201ENST00000348225 ANKRD18BA2A2Z9 1011 aa22.84■■□□□ 1.25
PTN-201ENST00000348225 FAM177BA6PVY3 158 aa22.84■■□□□ 1.25
PTN-201ENST00000348225 TRIM6-TRIM34B2RNG4 842 aa22.84■■□□□ 1.25
PTN-201ENST00000348225 TNNI3KQ59H18 835 aa22.84■■□□□ 1.25
PTN-201ENST00000348225 ARHGEF1Q92888 912 aaKnown RBP22.84■■□□□ 1.25
PTN-201ENST00000348225 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
PTN-201ENST00000348225 FPGT-TNNI3KV9GXZ4 949 aa22.84■■□□□ 1.25
PTN-201ENST00000348225 EP400Q96L91 3159 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 RFC4P35249 363 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 ATG9AQ7Z3C6 839 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 GPR108Q9NPR9 543 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 UBR3Q6ZT12 1888 aa22.83■■□□□ 1.25
PTN-201ENST00000348225 COL24A1Q17RW2 1714 aa22.83■■□□□ 1.24
PTN-201ENST00000348225 ITGA6P23229 1130 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 ZNF594Q96JF6 807 aaPredicted RBP22.82■■□□□ 1.24
PTN-201ENST00000348225 CCDC85AQ96PX6 553 aaPredicted RBP22.82■■□□□ 1.24
PTN-201ENST00000348225 GREM2Q9H772 168 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 SRP68Q9UHB9 627 aaKnown RBP22.82■■□□□ 1.24
PTN-201ENST00000348225 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 PLSCR1O15162 318 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 RILPL2Q969X0 211 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 NYXQ9GZU5 481 aa22.82■■□□□ 1.24
PTN-201ENST00000348225 CCDC8Q9H0W5 538 aaPredicted RBP22.82■■□□□ 1.24
PTN-201ENST00000348225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.82■■□□□ 1.24
PTN-201ENST00000348225 PHF14O94880 888 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 TBC1D9BQ66K14 1250 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 POTEAQ6S8J7 498 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 CNTROBQ8N137 903 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 DDRGK1Q96HY6 314 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 SETDB2Q96T68 719 aa22.81■■□□□ 1.24
PTN-201ENST00000348225 HCLS1P14317 486 aaPredicted RBP22.8■■□□□ 1.24
PTN-201ENST00000348225 LRRC24Q50LG9 513 aa22.8■■□□□ 1.24
PTN-201ENST00000348225 APBA3O96018 575 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 SSFA2P28290 1259 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 CCDC152Q4G0S7 254 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 C22orf23Q9BZE7 217 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 BICDL1Q6ZP65 573 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 AMIGO3Q86WK7 504 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 IPO9Q96P70 1041 aaKnown RBP22.79■■□□□ 1.24
PTN-201ENST00000348225 CEP126Q9P2H0 1117 aa22.79■■□□□ 1.24
PTN-201ENST00000348225 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
PTN-201ENST00000348225 LRP5O75197 1615 aa22.78■■□□□ 1.24
PTN-201ENST00000348225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.78■■□□□ 1.24
PTN-201ENST00000348225 PUS3Q9BZE2 481 aaKnown RBP22.78■■□□□ 1.24
PTN-201ENST00000348225 TLR7Q9NYK1 1049 aaKnown RBP22.78■■□□□ 1.24
PTN-201ENST00000348225 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
PTN-201ENST00000348225 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
PTN-201ENST00000348225 ZNF609O15014 1411 aa22.77■■□□□ 1.24
PTN-201ENST00000348225 GTF2E1P29083 439 aaPredicted RBP22.77■■□□□ 1.24
PTN-201ENST00000348225 LDHAL6AQ6ZMR3 332 aa22.77■■□□□ 1.24
PTN-201ENST00000348225 AKAP2Q9Y2D5 859 aa22.77■■□□□ 1.24
PTN-201ENST00000348225 CNNM1Q9NRU3 951 aa22.76■■□□□ 1.23
PTN-201ENST00000348225 DBNLQ9UJU6 430 aaKnown RBP22.76■■□□□ 1.23
PTN-201ENST00000348225 ERFEQ4G0M1 354 aa22.75■■□□□ 1.23
PTN-201ENST00000348225 NBPF5PQ86XG9 351 aaPredicted RBP22.75■■□□□ 1.23
PTN-201ENST00000348225 PROM2Q8N271 834 aa22.75■■□□□ 1.23
PTN-201ENST00000348225 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 REC8O95072 547 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
PTN-201ENST00000348225 ATP5JP18859 108 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 METTL24Q5JXM2 366 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 TPTE2Q6XPS3 522 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 EVI5LQ96CN4 794 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 DBNDD2Q9BQY9 259 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 RIPOR2Q9Y4F9 1068 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 CARMIL3Q8ND23 1372 aa22.74■■□□□ 1.23
PTN-201ENST00000348225 CHMLP26374 656 aa22.73■■□□□ 1.23
PTN-201ENST00000348225 RBM25P49756 843 aaKnown RBP22.73■■□□□ 1.23
PTN-201ENST00000348225 NEUROD6Q96NK8 337 aa22.73■■□□□ 1.23
PTN-201ENST00000348225 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
PTN-201ENST00000348225 CASZ1Q86V15 1759 aa22.72■■□□□ 1.23
PTN-201ENST00000348225 SF3B3Q15393 1217 aaKnown RBP22.71■■□□□ 1.23
PTN-201ENST00000348225 MROH5Q6ZUA9 1318 aa22.71■■□□□ 1.23
PTN-201ENST00000348225 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
PTN-201ENST00000348225 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
PTN-201ENST00000348225 CDC5LQ99459 802 aaKnown RBP22.71■■□□□ 1.23
PTN-201ENST00000348225 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
PTN-201ENST00000348225 ESYT1Q9BSJ8 1104 aa22.71■■□□□ 1.23
PTN-201ENST00000348225 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
PTN-201ENST00000348225 NPHP1O15259 732 aa22.69■■□□□ 1.22
PTN-201ENST00000348225 TIMM10P62072 90 aa22.69■■□□□ 1.22
PTN-201ENST00000348225 NLRP3Q96P20 1036 aa22.69■■□□□ 1.22
PTN-201ENST00000348225 HIP1O00291 1037 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 GYS1P13807 737 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 NFIXQ14938 502 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 SEC31BQ9NQW1 1179 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 SPEF2Q9C093 1822 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 ATP2B3Q16720 1220 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms