RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
SMTN-202ENST00000347557 MYRIPQ8NFW9 859 aa17.28■□□□□ 0.36
SMTN-202ENST00000347557 HIP1O00291 1037 aa17.28■□□□□ 0.36
SMTN-202ENST00000347557 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
SMTN-202ENST00000347557 IGKV5-2P06315 115 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
SMTN-202ENST00000347557 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
SMTN-202ENST00000347557 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.35
SMTN-202ENST00000347557 TFCP2Q12800 502 aa17.27■□□□□ 0.35
SMTN-202ENST00000347557 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.35
SMTN-202ENST00000347557 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.35
SMTN-202ENST00000347557 KCNF1Q9H3M0 494 aa17.27■□□□□ 0.35
SMTN-202ENST00000347557 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
SMTN-202ENST00000347557 DDX21Q9NR30 783 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMTN-202ENST00000347557 LRMPQ12912 555 aa17.26■□□□□ 0.35
SMTN-202ENST00000347557 CCDC186Q7Z3E2 898 aa17.26■□□□□ 0.35
SMTN-202ENST00000347557 BRF1Q92994 677 aa17.26■□□□□ 0.35
SMTN-202ENST00000347557 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
SMTN-202ENST00000347557 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 DNAJC25Q9H1X3 360 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 NR1I2O75469 434 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 GUCY1B3Q02153 619 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 Q6ZUG5 572 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 KIF3AQ9Y496 699 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 A0A087WWV3 80 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 LEO1Q8WVC0 666 aaPredicted RBP17.25■□□□□ 0.35
SMTN-202ENST00000347557 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
SMTN-202ENST00000347557 HMGN5P82970 282 aaKnown RBP17.24■□□□□ 0.35
SMTN-202ENST00000347557 PXDNQ92626 1479 aa17.24■□□□□ 0.35
SMTN-202ENST00000347557 CCT2P78371 535 aaKnown RBP17.24■□□□□ 0.35
SMTN-202ENST00000347557 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
SMTN-202ENST00000347557 NEK1Q96PY6 1258 aa17.24■□□□□ 0.35
SMTN-202ENST00000347557 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
SMTN-202ENST00000347557 NEURL1BA8MQ27 555 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 CBX1P83916 185 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
SMTN-202ENST00000347557 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 DBNLQ9UJU6 430 aaKnown RBP17.23■□□□□ 0.35
SMTN-202ENST00000347557 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 TAF5LO75529 589 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 GCKRQ14397 625 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 CHST3Q7LGC8 479 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 FTOQ9C0B1 505 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMTN-202ENST00000347557 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
SMTN-202ENST00000347557 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
SMTN-202ENST00000347557 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
SMTN-202ENST00000347557 ZNF165P49910 485 aa17.22■□□□□ 0.35
SMTN-202ENST00000347557 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
SMTN-202ENST00000347557 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
SMTN-202ENST00000347557 PDIA6Q15084 440 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
SMTN-202ENST00000347557 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 A0A087WZG4 1122 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 KCNB2Q92953 911 aa17.21■□□□□ 0.35
SMTN-202ENST00000347557 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.34
SMTN-202ENST00000347557 PGBD1Q96JS3 809 aa17.21■□□□□ 0.34
SMTN-202ENST00000347557 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 MTERF4Q7Z6M4 381 aaKnown RBP17.2■□□□□ 0.34
SMTN-202ENST00000347557 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 GOLIM4O00461 696 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
SMTN-202ENST00000347557 NPHP3Q7Z494 1330 aa17.2■□□□□ 0.34
SMTN-202ENST00000347557 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
SMTN-202ENST00000347557 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
SMTN-202ENST00000347557 ZNF330Q9Y3S2 320 aaPredicted RBP17.19■□□□□ 0.34
SMTN-202ENST00000347557 CYP21A2P08686 494 aa17.19■□□□□ 0.34
SMTN-202ENST00000347557 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
SMTN-202ENST00000347557 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
SMTN-202ENST00000347557 TIMM10P62072 90 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
SMTN-202ENST00000347557 SPTLC3Q9NUV7 552 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
SMTN-202ENST00000347557 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 CLIP2Q9UDT6 1046 aa17.18■□□□□ 0.34
SMTN-202ENST00000347557 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
SMTN-202ENST00000347557 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
SMTN-202ENST00000347557 CLSTN2Q9H4D0 955 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms