RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
USF2-202ENST00000343550 CDCA7LQ96GN5 454 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 CLEC11AQ9Y240 323 aa23.13■■□□□ 1.29
USF2-202ENST00000343550 ABCC4O15439 1325 aa23.12■■□□□ 1.29
USF2-202ENST00000343550 ITGBL1O95965 494 aaPredicted RBP23.12■■□□□ 1.29
USF2-202ENST00000343550 SLC4A2P04920 1241 aa23.12■■□□□ 1.29
USF2-202ENST00000343550 GJA3Q9Y6H8 435 aa23.12■■□□□ 1.29
USF2-202ENST00000343550 COL4A5P29400 1685 aa23.11■■□□□ 1.29
USF2-202ENST00000343550 BBOX1O75936 387 aa23.11■■□□□ 1.29
USF2-202ENST00000343550 SH3TC1Q8TE82 1336 aa23.11■■□□□ 1.29
USF2-202ENST00000343550 COL13A1Q5TAT6 717 aaPredicted RBP23.1■■□□□ 1.29
USF2-202ENST00000343550 MKRN1Q9UHC7 482 aaKnown RBP23.1■■□□□ 1.29
USF2-202ENST00000343550 RIC3Q7Z5B4 369 aa23.09■■□□□ 1.29
USF2-202ENST00000343550 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
USF2-202ENST00000343550 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
USF2-202ENST00000343550 VPS33BQ9H267 617 aa23.09■■□□□ 1.29
USF2-202ENST00000343550 PPIP5K2O43314 1243 aa23.08■■□□□ 1.29
USF2-202ENST00000343550 DDX46Q7L014 1031 aaKnown RBP23.08■■□□□ 1.29
USF2-202ENST00000343550 G2E3Q7L622 706 aa23.08■■□□□ 1.29
USF2-202ENST00000343550 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
USF2-202ENST00000343550 HSPA1AP0DMV8 641 aaKnown RBP23.08■■□□□ 1.28
USF2-202ENST00000343550 HSPA1BP0DMV9 641 aaKnown RBP23.08■■□□□ 1.28
USF2-202ENST00000343550 LMOD1P29536 600 aaPredicted RBP23.08■■□□□ 1.28
USF2-202ENST00000343550 AOC3Q16853 763 aa23.08■■□□□ 1.28
USF2-202ENST00000343550 ZNF428Q96B54 188 aa23.08■■□□□ 1.28
USF2-202ENST00000343550 ANKRD36CQ5JPF3 1778 aa23.07■■□□□ 1.28
USF2-202ENST00000343550 TMEM88BA6NKF7 163 aa23.07■■□□□ 1.28
USF2-202ENST00000343550 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
USF2-202ENST00000343550 MAP1SQ66K74 1059 aaPredicted RBP23.07■■□□□ 1.28
USF2-202ENST00000343550 CNTROBQ8N137 903 aa23.07■■□□□ 1.28
USF2-202ENST00000343550 SUPT20HQ8NEM7 779 aa23.07■■□□□ 1.28
USF2-202ENST00000343550 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
USF2-202ENST00000343550 RTFDC1Q9BY42 306 aaPredicted RBP23.07■■□□□ 1.28
USF2-202ENST00000343550 SCNN1DP51172 638 aa23.06■■□□□ 1.28
USF2-202ENST00000343550 DPP8Q6V1X1 898 aaPredicted RBP23.06■■□□□ 1.28
USF2-202ENST00000343550 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 EPS15P42566 896 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 TRIM28Q13263 835 aaKnown RBP23.05■■□□□ 1.28
USF2-202ENST00000343550 GRAPQ13588 217 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 MPNDQ8N594 471 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
USF2-202ENST00000343550 ADAMTSL1Q8N6G6 1762 aa23.05■■□□□ 1.28
USF2-202ENST00000343550 FAM89AQ96GI7 184 aa23.04■■□□□ 1.28
USF2-202ENST00000343550 CNTNAP1P78357 1384 aa23.04■■□□□ 1.28
USF2-202ENST00000343550 PI4KAP2A4QPH2 592 aa23.03■■□□□ 1.28
USF2-202ENST00000343550 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
USF2-202ENST00000343550 PI4KAP1Q8N8J0 262 aa23.03■■□□□ 1.28
USF2-202ENST00000343550 METTL22Q9BUU2 404 aaPredicted RBP23.03■■□□□ 1.28
USF2-202ENST00000343550 ZNRF3Q9ULT6 936 aa23.03■■□□□ 1.28
USF2-202ENST00000343550 MAP3K2Q9Y2U5 619 aa23.03■■□□□ 1.28
USF2-202ENST00000343550 FLIIQ13045 1269 aa23.03■■□□□ 1.28
USF2-202ENST00000343550 CACNA1FO60840 1977 aa23.02■■□□□ 1.28
USF2-202ENST00000343550 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
USF2-202ENST00000343550 MYD88Q99836 296 aa23.02■■□□□ 1.28
USF2-202ENST00000343550 LAMB2P55268 1798 aa23.01■■□□□ 1.27
USF2-202ENST00000343550 CXCL9Q07325 125 aa23.01■■□□□ 1.27
USF2-202ENST00000343550 KIAA2012Q0VF49 1180 aa23.01■■□□□ 1.27
USF2-202ENST00000343550 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
USF2-202ENST00000343550 USP50Q70EL3 339 aaPredicted RBP23.01■■□□□ 1.27
USF2-202ENST00000343550 LTBP1Q14766 1721 aa23■■□□□ 1.27
USF2-202ENST00000343550 RTL5Q5HYW3 569 aaPredicted RBP22.99■■□□□ 1.27
USF2-202ENST00000343550 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
USF2-202ENST00000343550 VEGFBP49765 207 aa22.98■■□□□ 1.27
USF2-202ENST00000343550 FKBP5Q13451 457 aaPredicted RBP22.98■■□□□ 1.27
USF2-202ENST00000343550 CCDC191Q8NCU4 936 aa22.98■■□□□ 1.27
USF2-202ENST00000343550 TNS4Q8IZW8 715 aa22.98■■□□□ 1.27
USF2-202ENST00000343550 IRS4O14654 1257 aaPredicted RBP22.97■■□□□ 1.27
USF2-202ENST00000343550 IGKV5-2P06315 115 aa22.97■■□□□ 1.27
USF2-202ENST00000343550 CIAPIN1Q6FI81 312 aa22.97■■□□□ 1.27
USF2-202ENST00000343550 CELF1Q92879 486 aaKnown RBP22.97■■□□□ 1.27
USF2-202ENST00000343550 ADARB2Q9NS39 739 aaKnown RBP22.97■■□□□ 1.27
USF2-202ENST00000343550 GMPSP49915 693 aaPredicted RBP22.96■■□□□ 1.27
USF2-202ENST00000343550 DEFB115Q30KQ5 88 aa22.96■■□□□ 1.27
USF2-202ENST00000343550 RASSF10A6NK89 507 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 RAD17O75943 681 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 NEXNQ0ZGT2 675 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 TNIP1Q15025 636 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 MRPL50Q8N5N7 158 aaKnown RBP22.95■■□□□ 1.26
USF2-202ENST00000343550 ZBTB38Q8NAP3 1195 aaPredicted RBP22.95■■□□□ 1.26
USF2-202ENST00000343550 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 CWC25Q9NXE8 425 aaPredicted RBP22.95■■□□□ 1.26
USF2-202ENST00000343550 NSFL1CQ9UNZ2 370 aaKnown RBP22.95■■□□□ 1.26
USF2-202ENST00000343550 TAF1P21675 1872 aa22.95■■□□□ 1.26
USF2-202ENST00000343550 DDX60Q8IY21 1712 aaKnown RBP22.94■■□□□ 1.26
USF2-202ENST00000343550 CT47B1P0C2W7 299 aaPredicted RBP22.94■■□□□ 1.26
USF2-202ENST00000343550 SSH1Q8WYL5 1049 aa22.94■■□□□ 1.26
USF2-202ENST00000343550 ABT1Q9ULW3 272 aaKnown RBP22.94■■□□□ 1.26
USF2-202ENST00000343550 FMR1Q06787 632 aaKnown RBP eCLIP22.93■■□□□ 1.26
USF2-202ENST00000343550 BCL2L13Q9BXK5 485 aa22.93■■□□□ 1.26
USF2-202ENST00000343550 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
USF2-202ENST00000343550 RPS8P62241 208 aaKnown RBP22.92■■□□□ 1.26
USF2-202ENST00000343550 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
USF2-202ENST00000343550 CWF19L2Q2TBE0 894 aaKnown RBP22.92■■□□□ 1.26
USF2-202ENST00000343550 CDHR2Q9BYE9 1310 aa22.92■■□□□ 1.26
USF2-202ENST00000343550 NEURL1BA8MQ27 555 aa22.92■■□□□ 1.26
USF2-202ENST00000343550 F6X3S4 739 aa22.92■■□□□ 1.26
USF2-202ENST00000343550 PCCAP05165 728 aaPredicted RBP22.92■■□□□ 1.26
USF2-202ENST00000343550 HSP90B1P14625 803 aaKnown RBP22.92■■□□□ 1.26
USF2-202ENST00000343550 ALDH1L2Q3SY69 923 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms