RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 ZNF496Q96IT1 587 aaPredicted RBP28.57■■■□□ 2.16
NELFB-201ENST00000343053 COL15A1P39059 1388 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 HDAC5Q9UQL6 1122 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 C5P01031 1676 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 HIP1O00291 1037 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 RNF20Q5VTR2 975 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 ZMYND15Q9H091 742 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 MED23Q9ULK4 1368 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 PIBF1Q8WXW3 757 aa28.56■■■□□ 2.16
NELFB-201ENST00000343053 UTYO14607 1347 aa28.55■■■□□ 2.16
NELFB-201ENST00000343053 DDX46Q7L014 1031 aaKnown RBP28.55■■■□□ 2.16
NELFB-201ENST00000343053 LUZP1Q86V48 1076 aa28.55■■■□□ 2.16
NELFB-201ENST00000343053 RAPGEF4Q8WZA2 1011 aa28.54■■■□□ 2.16
NELFB-201ENST00000343053 DACT1Q9NYF0 836 aa28.54■■■□□ 2.16
NELFB-201ENST00000343053 HSP90B1P14625 803 aaKnown RBP28.54■■■□□ 2.16
NELFB-201ENST00000343053 NUP62CLQ9H1M0 184 aa28.54■■■□□ 2.16
NELFB-201ENST00000343053 TAF5LO75529 589 aa28.53■■■□□ 2.16
NELFB-201ENST00000343053 CCDC192P0DO97 292 aa28.53■■■□□ 2.16
NELFB-201ENST00000343053 KRT28Q7Z3Y7 464 aa28.53■■■□□ 2.16
NELFB-201ENST00000343053 DBNDD2Q9BQY9 259 aa28.53■■■□□ 2.16
NELFB-201ENST00000343053 ERBB3P21860 1342 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 GOLGA6L4A6NEF3 574 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 CEBPZQ03701 1054 aaKnown RBP28.52■■■□□ 2.16
NELFB-201ENST00000343053 SPATA32Q96LK8 384 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 KCNF1Q9H3M0 494 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 PYCARDQ9ULZ3 195 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 SLC52A2Q9HAB3 445 aa28.52■■■□□ 2.16
NELFB-201ENST00000343053 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
NELFB-201ENST00000343053 KDM6AO15550 1401 aaPredicted RBP28.51■■■□□ 2.16
NELFB-201ENST00000343053 MAP3K11Q16584 847 aa28.51■■■□□ 2.15
NELFB-201ENST00000343053 TNNI3KQ59H18 835 aa28.5■■■□□ 2.15
NELFB-201ENST00000343053 METTL22Q9BUU2 404 aaPredicted RBP28.5■■■□□ 2.15
NELFB-201ENST00000343053 FPGT-TNNI3KV9GXZ4 949 aa28.5■■■□□ 2.15
NELFB-201ENST00000343053 NPHP3Q7Z494 1330 aa28.5■■■□□ 2.15
NELFB-201ENST00000343053 ANKRD13DQ6ZTN6 518 aa28.5■■■□□ 2.15
NELFB-201ENST00000343053 PTPN12Q05209 780 aaKnown RBP28.49■■■□□ 2.15
NELFB-201ENST00000343053 TYRO3Q06418 890 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 CABLES1Q8TDN4 633 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 MRVI1Q9Y6F6 885 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 PHRF1Q9P1Y6 1649 aaKnown RBP28.49■■■□□ 2.15
NELFB-201ENST00000343053 DYNC1I1O14576 645 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 Q6ZUG5 572 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 TNMDQ9H2S6 317 aa28.49■■■□□ 2.15
NELFB-201ENST00000343053 ZNF609O15014 1411 aa28.48■■■□□ 2.15
NELFB-201ENST00000343053 CSB-PGBD3P0DP91 1061 aa28.48■■■□□ 2.15
NELFB-201ENST00000343053 PDCP20941 246 aa28.48■■■□□ 2.15
NELFB-201ENST00000343053 BICD2Q8TD16 824 aa28.48■■■□□ 2.15
NELFB-201ENST00000343053 ANKRD1Q15327 319 aa28.47■■■□□ 2.15
NELFB-201ENST00000343053 ANO6Q4KMQ2 910 aa28.47■■■□□ 2.15
NELFB-201ENST00000343053 LEO1Q8WVC0 666 aaPredicted RBP28.47■■■□□ 2.15
NELFB-201ENST00000343053 BRF1Q92994 677 aa28.47■■■□□ 2.15
NELFB-201ENST00000343053 CHRNA2Q15822 529 aa28.47■■■□□ 2.15
NELFB-201ENST00000343053 NR1I2O75469 434 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 FGD1P98174 961 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 A0A087WZG4 1122 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 PHKG2P15735 406 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 NEK1Q96PY6 1258 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 SNRKQ9NRH2 765 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 OVOS2A0A0G2JMS6 1433 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 SLIT3O75094 1523 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 CYP21A2P08686 494 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
NELFB-201ENST00000343053 NAP1L2Q9ULW6 460 aaPredicted RBP28.46■■■□□ 2.15
NELFB-201ENST00000343053 A0A0G2JLW4 131 aa28.45■■■□□ 2.14
NELFB-201ENST00000343053 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.14
NELFB-201ENST00000343053 PTGS1P23219 599 aa28.45■■■□□ 2.14
NELFB-201ENST00000343053 RFX5P48382 616 aaPredicted RBP28.45■■■□□ 2.14
NELFB-201ENST00000343053 FTOQ9C0B1 505 aaKnown RBP eCLIP28.45■■■□□ 2.147e-6■■□□□ 12.9
NELFB-201ENST00000343053 FAM200AQ8TCP9 573 aa28.45■■■□□ 2.14
NELFB-201ENST00000343053 PGBD1Q96JS3 809 aa28.44■■■□□ 2.14
NELFB-201ENST00000343053 NEUROD6Q96NK8 337 aa28.44■■■□□ 2.14
NELFB-201ENST00000343053 MYRIPQ8NFW9 859 aa28.44■■■□□ 2.14
NELFB-201ENST00000343053 GTF3C6Q969F1 213 aa28.44■■■□□ 2.14
NELFB-201ENST00000343053 H3BQV1 296 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 MEGF6O75095 1541 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 TATP17735 454 aaPredicted RBP28.43■■■□□ 2.14
NELFB-201ENST00000343053 ATP5JP18859 108 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 CBX8Q9HC52 389 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 HMG20BQ9P0W2 317 aa28.43■■■□□ 2.14
NELFB-201ENST00000343053 AFDNP55196 1824 aaKnown RBP28.42■■■□□ 2.14
NELFB-201ENST00000343053 STOX1Q6ZVD7 989 aa28.42■■■□□ 2.14
NELFB-201ENST00000343053 COPRSQ9NQ92 184 aa28.42■■■□□ 2.14
NELFB-201ENST00000343053 LMBR1LQ6UX01 489 aa28.42■■■□□ 2.14
NELFB-201ENST00000343053 SCAND2PQ9GZW5 306 aaPredicted RBP28.42■■■□□ 2.14
NELFB-201ENST00000343053 NRBP1Q9UHY1 535 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 ELP1O95163 1332 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 A0A087WWV3 80 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 CHST3Q7LGC8 479 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 DRC7Q8IY82 874 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 DNAJC25Q9H1X3 360 aa28.41■■■□□ 2.14
NELFB-201ENST00000343053 GOLIM4O00461 696 aa28.4■■■□□ 2.14
NELFB-201ENST00000343053 LRMPQ12912 555 aa28.4■■■□□ 2.14
NELFB-201ENST00000343053 LRP10Q7Z4F1 713 aa28.4■■■□□ 2.14
NELFB-201ENST00000343053 SCRN1Q12765 414 aa28.4■■■□□ 2.14
NELFB-201ENST00000343053 PROSER2Q86WR7 435 aaPredicted RBP28.4■■■□□ 2.14
NELFB-201ENST00000343053 CCT2P78371 535 aaKnown RBP28.39■■■□□ 2.14
NELFB-201ENST00000343053 JCADQ9P266 1359 aa28.39■■■□□ 2.14
NELFB-201ENST00000343053 SNRPA1P09661 255 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms