RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
PDPK1-202ENST00000342085 PPFIA3O75145 1194 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 CCDC14Q49A88 953 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 CCDC50Q8IVM0 306 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
PDPK1-202ENST00000342085 TXNDC16Q9P2K2 825 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 CFAP58Q5T655 872 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 CEP135Q66GS9 1140 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.53■□□□□ 0.24
PDPK1-202ENST00000342085 NAA15Q9BXJ9 866 aaKnown RBP16.53■□□□□ 0.24
PDPK1-202ENST00000342085 JAG2Q9Y219 1238 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
PDPK1-202ENST00000342085 M0QZ92 97 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 CRCPO75575 148 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 DNAAF4Q8WXU2 420 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 CNGA1P29973 690 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
PDPK1-202ENST00000342085 TPD52P55327 224 aaPredicted RBP16.52■□□□□ 0.24
PDPK1-202ENST00000342085 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
PDPK1-202ENST00000342085 CCT6BQ92526 530 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 MX1P20591 662 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 NAPAP54920 295 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.24
PDPK1-202ENST00000342085 NAA16Q6N069 864 aaPredicted RBP16.52■□□□□ 0.24
PDPK1-202ENST00000342085 SLC4A4Q9Y6R1 1079 aa16.52■□□□□ 0.24
PDPK1-202ENST00000342085 STK25O00506 426 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.23
PDPK1-202ENST00000342085 ISM2Q6H9L7 571 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 GOLGA1Q92805 767 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 PLVAPQ9BX97 442 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 CUL4BQ13620 913 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 FAM169AQ9Y6X4 670 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
PDPK1-202ENST00000342085 GEN1Q17RS7 908 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
PDPK1-202ENST00000342085 F6X3S4 739 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 FCHSD2O94868 740 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.234e-6■□□□□ 11
PDPK1-202ENST00000342085 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 UBXN4Q92575 508 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 SLC8A3P57103 927 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 TRIM47Q96LD4 638 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
PDPK1-202ENST00000342085 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 ARID5AQ03989 594 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 NOP9Q86U38 636 aaKnown RBP16.51■□□□□ 0.23
PDPK1-202ENST00000342085 ANO10Q9NW15 660 aa16.51■□□□□ 0.23
PDPK1-202ENST00000342085 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
PDPK1-202ENST00000342085 GSDMBQ8TAX9 411 aa16.5■□□□□ 0.23
PDPK1-202ENST00000342085 MAK16Q9BXY0 300 aaKnown RBP16.5■□□□□ 0.23
PDPK1-202ENST00000342085 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
PDPK1-202ENST00000342085 WTAPQ15007 396 aa16.5■□□□□ 0.23
PDPK1-202ENST00000342085 BIN1O00499 593 aa16.5■□□□□ 0.23
PDPK1-202ENST00000342085 SPAG5Q96R06 1193 aa16.5■□□□□ 0.23
PDPK1-202ENST00000342085 UQCRFS1P1P0C7P4 283 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
PDPK1-202ENST00000342085 CCDC89Q8N998 374 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
PDPK1-202ENST00000342085 ANO3Q9BYT9 981 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 PRKAG2Q9UGJ0 569 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
PDPK1-202ENST00000342085 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
PDPK1-202ENST00000342085 LARP6Q9BRS8 491 aaKnown RBP16.49■□□□□ 0.23
PDPK1-202ENST00000342085 NME9Q86XW9 330 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
PDPK1-202ENST00000342085 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
PDPK1-202ENST00000342085 ZYXQ15942 572 aaKnown RBP16.48■□□□□ 0.23
PDPK1-202ENST00000342085 STAT6P42226 847 aa16.48■□□□□ 0.23
PDPK1-202ENST00000342085 IFI16Q16666 785 aaKnown RBP16.48■□□□□ 0.23
PDPK1-202ENST00000342085 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
PDPK1-202ENST00000342085 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
PDPK1-202ENST00000342085 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
PDPK1-202ENST00000342085 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
PDPK1-202ENST00000342085 CACYBPQ9HB71 228 aaKnown RBP16.48■□□□□ 0.23
PDPK1-202ENST00000342085 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
PDPK1-202ENST00000342085 GNPATO15228 680 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 MCM3P25205 808 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 DAPK3O43293 454 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
PDPK1-202ENST00000342085 ZBTB16Q05516 673 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 NCOA7Q8NI08 942 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 DDX12PQ92771 950 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
PDPK1-202ENST00000342085 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms