RNA–Protein interactions for RNA: ENST00000341983.8

BBC3-202, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-202ENST00000341983 SNED1Q8TER0 1413 aa27.6■■■□□ 2.01
BBC3-202ENST00000341983 NFKBIEO00221 500 aa27.59■■■□□ 2.01
BBC3-202ENST00000341983 CTSWP56202 376 aa27.59■■■□□ 2.01
BBC3-202ENST00000341983 RASSF7Q02833 373 aa27.59■■■□□ 2.01
BBC3-202ENST00000341983 CCDC85AQ96PX6 553 aaPredicted RBP27.59■■■□□ 2.01
BBC3-202ENST00000341983 HSP90B1P14625 803 aaKnown RBP27.58■■■□□ 2.01
BBC3-202ENST00000341983 DDX46Q7L014 1031 aaKnown RBP27.58■■■□□ 2.01
BBC3-202ENST00000341983 FRAT1Q92837 279 aaPredicted RBP27.58■■■□□ 2.01
BBC3-202ENST00000341983 PLA2G12BQ9BX93 195 aa27.58■■■□□ 2.01
BBC3-202ENST00000341983 LRRC37AA6NMS7 1700 aa27.58■■■□□ 2.01
BBC3-202ENST00000341983 PPEF1O14829 653 aaPredicted RBP27.57■■■□□ 2
BBC3-202ENST00000341983 TRIM27P14373 513 aa27.57■■■□□ 2
BBC3-202ENST00000341983 PRELPP51888 382 aa27.57■■■□□ 2
BBC3-202ENST00000341983 SEC31BQ9NQW1 1179 aa27.57■■■□□ 2
BBC3-202ENST00000341983 SPEF2Q9C093 1822 aa27.57■■■□□ 2
BBC3-202ENST00000341983 GRAPQ13588 217 aa27.57■■■□□ 2
BBC3-202ENST00000341983 TTLL11Q8NHH1 800 aa27.57■■■□□ 2
BBC3-202ENST00000341983 GRAPLQ8TC17 118 aaPredicted RBP27.57■■■□□ 2
BBC3-202ENST00000341983 CELF1Q92879 486 aaKnown RBP27.57■■■□□ 2
BBC3-202ENST00000341983 NBPF7P0C2Y1 421 aaPredicted RBP27.56■■■□□ 2
BBC3-202ENST00000341983 C9orf78Q9NZ63 289 aaPredicted RBP27.56■■■□□ 2
BBC3-202ENST00000341983 UTYO14607 1347 aa27.55■■■□□ 2
BBC3-202ENST00000341983 CCDC152Q4G0S7 254 aa27.55■■■□□ 2
BBC3-202ENST00000341983 ATF7IPQ6VMQ6 1270 aa27.55■■■□□ 2
BBC3-202ENST00000341983 CCDC93Q567U6 631 aa27.54■■■□□ 2
BBC3-202ENST00000341983 EPHA10Q5JZY3 1008 aa27.54■■■□□ 2
BBC3-202ENST00000341983 GREM2Q9H772 168 aa27.54■■■□□ 2
BBC3-202ENST00000341983 IPO8O15397 1037 aaKnown RBP27.53■■■□□ 2
BBC3-202ENST00000341983 CCT4P50991 539 aaKnown RBP27.53■■■□□ 2
BBC3-202ENST00000341983 FOXO4P98177 505 aa27.53■■■□□ 2
BBC3-202ENST00000341983 USP44Q9H0E7 712 aa27.53■■■□□ 2
BBC3-202ENST00000341983 SOGA3Q5TF21 947 aa27.52■■■□□ 2
BBC3-202ENST00000341983 KAZALD1Q96I82 304 aa27.52■■■□□ 2
BBC3-202ENST00000341983 ATP6V0A2Q9Y487 856 aa27.52■■■□□ 2
BBC3-202ENST00000341983 DICER1Q9UPY3 1922 aaKnown RBP27.52■■■□□ 2
BBC3-202ENST00000341983 BBOX1O75936 387 aa27.51■■■□□ 2
BBC3-202ENST00000341983 ZKSCAN2Q63HK3 967 aa27.51■■■□□ 2
BBC3-202ENST00000341983 CLUAP1Q96AJ1 413 aa27.51■■■□□ 2
BBC3-202ENST00000341983 SUCLG2Q96I99 432 aa27.51■■■□□ 2
BBC3-202ENST00000341983 RTL9Q8NET4 1388 aa27.51■■■□□ 2
BBC3-202ENST00000341983 CSF1RP07333 972 aa27.51■■□□□ 1.99
BBC3-202ENST00000341983 TIAM2Q8IVF5 1701 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 LTBP3Q9NS15 1303 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 YY1P25490 414 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 FAM161AQ3B820 660 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 INTS3Q68E01 1043 aaKnown RBP27.5■■□□□ 1.99
BBC3-202ENST00000341983 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 RCAN3Q9UKA8 241 aa27.5■■□□□ 1.99
BBC3-202ENST00000341983 LTBP1Q14766 1721 aa27.49■■□□□ 1.99
BBC3-202ENST00000341983 C9orf131Q5VYM1 1079 aa27.49■■□□□ 1.99
BBC3-202ENST00000341983 RPS8P62241 208 aaKnown RBP27.48■■□□□ 1.99
BBC3-202ENST00000341983 DUOX1Q9NRD9 1551 aa27.48■■□□□ 1.99
BBC3-202ENST00000341983 CC2D2BQ6DHV5 1058 aa27.47■■□□□ 1.99
BBC3-202ENST00000341983 SP8Q8IXZ3 490 aa27.47■■□□□ 1.99
BBC3-202ENST00000341983 RTKN2Q8IZC4 609 aa27.47■■□□□ 1.99
BBC3-202ENST00000341983 FKBP4Q02790 459 aaKnown RBP eCLIP27.46■■□□□ 1.99
BBC3-202ENST00000341983 RNF181Q9P0P0 153 aa27.46■■□□□ 1.99
BBC3-202ENST00000341983 LMNB1P20700 586 aa27.46■■□□□ 1.99
BBC3-202ENST00000341983 LMBR1LQ6UX01 489 aa27.46■■□□□ 1.99
BBC3-202ENST00000341983 RLBP1P12271 317 aa27.45■■□□□ 1.98
BBC3-202ENST00000341983 ITGA6P23229 1130 aa27.45■■□□□ 1.98
BBC3-202ENST00000341983 TMC4Q7Z404 712 aa27.45■■□□□ 1.98
BBC3-202ENST00000341983 BICC1Q9H694 974 aaKnown RBP27.45■■□□□ 1.98
BBC3-202ENST00000341983 TMEM57Q8N5G2 664 aa27.44■■□□□ 1.98
BBC3-202ENST00000341983 ANKRD44Q8N8A2 993 aa27.44■■□□□ 1.98
BBC3-202ENST00000341983 PSMD1Q99460 953 aa27.44■■□□□ 1.98
BBC3-202ENST00000341983 MEIS3Q99687 375 aa27.44■■□□□ 1.98
BBC3-202ENST00000341983 ZNF277Q9NRM2 450 aaPredicted RBP27.44■■□□□ 1.98
BBC3-202ENST00000341983 ANKRD18AQ8IVF6 992 aa27.43■■□□□ 1.98
BBC3-202ENST00000341983 CDC5LQ99459 802 aaKnown RBP27.43■■□□□ 1.98
BBC3-202ENST00000341983 COL4A5P29400 1685 aa27.43■■□□□ 1.98
BBC3-202ENST00000341983 A0A1B0GUL6 1792 aa27.42■■□□□ 1.98
BBC3-202ENST00000341983 RABL6Q3YEC7 729 aaPredicted RBP27.41■■□□□ 1.98
BBC3-202ENST00000341983 CHMP3Q9Y3E7 222 aa27.41■■□□□ 1.98
BBC3-202ENST00000341983 GRIPAP1Q4V328 841 aa27.41■■□□□ 1.98
BBC3-202ENST00000341983 DZIP1LQ8IYY4 767 aaKnown RBP27.41■■□□□ 1.98
BBC3-202ENST00000341983 PLIN1O60240 522 aa27.4■■□□□ 1.98
BBC3-202ENST00000341983 UBTFL1P0CB47 393 aaPredicted RBP27.4■■□□□ 1.98
BBC3-202ENST00000341983 GPSM2P81274 684 aa27.4■■□□□ 1.98
BBC3-202ENST00000341983 MPNDQ8N594 471 aa27.4■■□□□ 1.98
BBC3-202ENST00000341983 TMX4Q9H1E5 349 aaPredicted RBP27.4■■□□□ 1.98
BBC3-202ENST00000341983 DPP8Q6V1X1 898 aaPredicted RBP27.39■■□□□ 1.98
BBC3-202ENST00000341983 FTSJ3Q8IY81 847 aaKnown RBP27.39■■□□□ 1.98
BBC3-202ENST00000341983 RTFDC1Q9BY42 306 aaPredicted RBP27.39■■□□□ 1.98
BBC3-202ENST00000341983 ANKRD18BA2A2Z9 1011 aa27.38■■□□□ 1.97
BBC3-202ENST00000341983 IFIT5Q13325 482 aaKnown RBP27.38■■□□□ 1.97
BBC3-202ENST00000341983 PANK1Q8TE04 598 aa27.38■■□□□ 1.97
BBC3-202ENST00000341983 BSDC1Q9NW68 430 aaPredicted RBP27.38■■□□□ 1.97
BBC3-202ENST00000341983 ZNF594Q96JF6 807 aaPredicted RBP27.37■■□□□ 1.97
BBC3-202ENST00000341983 NSFL1CQ9UNZ2 370 aaKnown RBP27.37■■□□□ 1.97
BBC3-202ENST00000341983 LRRFIP2Q9Y608 721 aaKnown RBP27.37■■□□□ 1.97
BBC3-202ENST00000341983 IARSP41252 1262 aaKnown RBP27.36■■□□□ 1.97
BBC3-202ENST00000341983 IGHMBP2P38935 993 aaKnown RBP27.36■■□□□ 1.97
BBC3-202ENST00000341983 POLLQ9UGP5 575 aa27.36■■□□□ 1.97
BBC3-202ENST00000341983 MINPP1Q9UNW1 487 aa27.36■■□□□ 1.97
BBC3-202ENST00000341983 CCDC57Q2TAC2 916 aa27.35■■□□□ 1.97
BBC3-202ENST00000341983 ZNF784Q8NCA9 323 aaPredicted RBP27.35■■□□□ 1.97
BBC3-202ENST00000341983 PODXL2Q9NZ53 605 aa27.34■■□□□ 1.97
BBC3-202ENST00000341983 AOC3Q16853 763 aa27.33■■□□□ 1.97
BBC3-202ENST00000341983 ITPRIPQ8IWB1 547 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms