RNA–Protein interactions for RNA: ENST00000341441.9

MEST-202, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEST, Length 2,443 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-202ENST00000341441 DBNLQ9UJU6 430 aaKnown RBP20.35■□□□□ 0.85
MEST-202ENST00000341441 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
MEST-202ENST00000341441 RGPD5Q99666 1765 aa20.35■□□□□ 0.85
MEST-202ENST00000341441 ATP5JP18859 108 aa20.34■□□□□ 0.85
MEST-202ENST00000341441 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
MEST-202ENST00000341441 ANKRD13DQ6ZTN6 518 aa20.34■□□□□ 0.85
MEST-202ENST00000341441 ZNF496Q96IT1 587 aaPredicted RBP20.34■□□□□ 0.85
MEST-202ENST00000341441 LIG1P18858 919 aa20.34■□□□□ 0.85
MEST-202ENST00000341441 RFX5P48382 616 aaPredicted RBP20.34■□□□□ 0.85
MEST-202ENST00000341441 STK3Q13188 491 aa20.34■□□□□ 0.85
MEST-202ENST00000341441 DNTTIP2Q5QJE6 756 aaKnown RBP20.34■□□□□ 0.85
MEST-202ENST00000341441 TFCP2Q12800 502 aa20.33■□□□□ 0.85
MEST-202ENST00000341441 TNNI3KQ59H18 835 aa20.33■□□□□ 0.85
MEST-202ENST00000341441 C17orf53Q8N3J3 647 aaPredicted RBP20.33■□□□□ 0.85
MEST-202ENST00000341441 FPGT-TNNI3KV9GXZ4 949 aa20.33■□□□□ 0.85
MEST-202ENST00000341441 COL15A1P39059 1388 aa20.33■□□□□ 0.85
MEST-202ENST00000341441 TRPM3Q9HCF6 1732 aaPredicted RBP20.33■□□□□ 0.84
MEST-202ENST00000341441 PHKG2P15735 406 aa20.33■□□□□ 0.84
MEST-202ENST00000341441 PTPN12Q05209 780 aaKnown RBP20.33■□□□□ 0.84
MEST-202ENST00000341441 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.84
MEST-202ENST00000341441 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.84
MEST-202ENST00000341441 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.84
MEST-202ENST00000341441 PIP4K2AP48426 406 aaPredicted RBP20.32■□□□□ 0.84
MEST-202ENST00000341441 CAMK4Q16566 473 aa20.32■□□□□ 0.84
MEST-202ENST00000341441 TFIP11Q9UBB9 837 aaKnown RBP20.32■□□□□ 0.84
MEST-202ENST00000341441 USP16Q9Y5T5 823 aa20.32■□□□□ 0.84
MEST-202ENST00000341441 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
MEST-202ENST00000341441 MAP3K11Q16584 847 aa20.32■□□□□ 0.84
MEST-202ENST00000341441 SCAND2PQ9GZW5 306 aaPredicted RBP20.32■□□□□ 0.84
MEST-202ENST00000341441 SCN11AQ9UI33 1791 aa20.31■□□□□ 0.84
MEST-202ENST00000341441 KRT32Q14532 448 aa20.31■□□□□ 0.84
MEST-202ENST00000341441 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
MEST-202ENST00000341441 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
MEST-202ENST00000341441 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
MEST-202ENST00000341441 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
MEST-202ENST00000341441 CHGBP05060 677 aa20.3■□□□□ 0.84
MEST-202ENST00000341441 TATP17735 454 aaPredicted RBP20.3■□□□□ 0.84
MEST-202ENST00000341441 NEK1Q96PY6 1258 aa20.3■□□□□ 0.84
MEST-202ENST00000341441 SPTLC3Q9NUV7 552 aa20.3■□□□□ 0.84
MEST-202ENST00000341441 RABL6Q3YEC7 729 aaPredicted RBP20.29■□□□□ 0.84
MEST-202ENST00000341441 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 LEO1Q8WVC0 666 aaPredicted RBP20.29■□□□□ 0.84
MEST-202ENST00000341441 DACT1Q9NYF0 836 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 MRVI1Q9Y6F6 885 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 JAK2O60674 1132 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 SNRPA1P09661 255 aaKnown RBP20.29■□□□□ 0.84
MEST-202ENST00000341441 TYRO3Q06418 890 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 CCDC129Q6ZRS4 1044 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 MYRIPQ8NFW9 859 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 GTF3C6Q969F1 213 aa20.29■□□□□ 0.84
MEST-202ENST00000341441 SEC62Q99442 399 aaKnown RBP20.29■□□□□ 0.84
MEST-202ENST00000341441 ZNF609O15014 1411 aa20.28■□□□□ 0.84
MEST-202ENST00000341441 GOLGA6L4A6NEF3 574 aa20.28■□□□□ 0.84
MEST-202ENST00000341441 DNAJC2Q99543 621 aaKnown RBP20.28■□□□□ 0.84
MEST-202ENST00000341441 DBNDD2Q9BQY9 259 aa20.28■□□□□ 0.84
MEST-202ENST00000341441 CKAP2LQ8IYA6 745 aa20.28■□□□□ 0.84
MEST-202ENST00000341441 TNMDQ9H2S6 317 aa20.28■□□□□ 0.84
MEST-202ENST00000341441 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
MEST-202ENST00000341441 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 KCNF1Q9H3M0 494 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
MEST-202ENST00000341441 MEGF6O75095 1541 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 CYP21A2P08686 494 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 Q6ZUG5 572 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 SPC24Q8NBT2 197 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 PRIMPOLQ96LW4 560 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 HAUS7Q99871 368 aa20.27■□□□□ 0.84
MEST-202ENST00000341441 A0A087WZG4 1122 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.26■□□□□ 0.83
MEST-202ENST00000341441 RFX7Q2KHR2 1363 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 LUZP1Q86V48 1076 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 KIAA1524Q8TCG1 905 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 BRF1Q92994 677 aa20.26■□□□□ 0.83
MEST-202ENST00000341441 DDX19AQ9NUU7 478 aaKnown RBP20.26■□□□□ 0.83
MEST-202ENST00000341441 TPM3P06753 285 aa20.25■□□□□ 0.83
MEST-202ENST00000341441 DDX46Q7L014 1031 aaKnown RBP20.25■□□□□ 0.83
MEST-202ENST00000341441 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
MEST-202ENST00000341441 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
MEST-202ENST00000341441 PGBD1Q96JS3 809 aa20.25■□□□□ 0.83
MEST-202ENST00000341441 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
MEST-202ENST00000341441 PYCARDQ9ULZ3 195 aa20.25■□□□□ 0.83
MEST-202ENST00000341441 MST1RQ04912 1400 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
MEST-202ENST00000341441 HMGN5P82970 282 aaKnown RBP20.24■□□□□ 0.83
MEST-202ENST00000341441 RESTQ13127 1097 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 ANO6Q4KMQ2 910 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 RBM43Q6ZSC3 357 aaKnown RBP20.24■□□□□ 0.83
MEST-202ENST00000341441 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 CLSTN2Q9H4D0 955 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 CYP27B1O15528 508 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 CASP7P55210 303 aa20.24■□□□□ 0.83
MEST-202ENST00000341441 AFDNP55196 1824 aaKnown RBP20.24■□□□□ 0.83
MEST-202ENST00000341441 GOLGA6L6A8MZA4 724 aa20.23■□□□□ 0.83
MEST-202ENST00000341441 NR1I2O75469 434 aa20.23■□□□□ 0.83
MEST-202ENST00000341441 MTERF4Q7Z6M4 381 aaKnown RBP20.23■□□□□ 0.83
MEST-202ENST00000341441 DDX11Q96FC9 970 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms