RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 FBXO33Q7Z6M2 555 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 RGL4Q8IZJ4 473 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 IFT43Q96FT9 208 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 MYO19Q96H55 970 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 CCDC136Q96JN2 1154 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC30-201ENST00000340612 BRD2P25440 801 aaKnown RBP3.31□□□□□ -1.88
CCDC30-201ENST00000340612 GTF2E1P29083 439 aaPredicted RBP3.31□□□□□ -1.88
CCDC30-201ENST00000340612 ZAP70P43403 619 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 TREML1Q86YW5 311 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 ZSCAN29Q8IWY8 852 aaPredicted RBP3.31□□□□□ -1.88
CCDC30-201ENST00000340612 GPR152Q8TDT2 470 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 EDEM1Q92611 657 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 FAM161BQ96MY7 647 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 WWC3Q9ULE0 1092 aa3.31□□□□□ -1.88
CCDC30-201ENST00000340612 RNF144AP50876 292 aaPredicted RBP3.3□□□□□ -1.88
CCDC30-201ENST00000340612 HIRAP54198 1017 aaPredicted RBP3.3□□□□□ -1.88
CCDC30-201ENST00000340612 C11orf91Q3C1V1 193 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 FOXR1Q6PIV2 292 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 LYSMD3Q7Z3D4 306 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 RHPN1Q8TCX5 695 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 IGHA2P01877 340 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 ERCC3P19447 782 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 ATP4AP20648 1035 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 EAPPQ56P03 285 aaPredicted RBP3.3□□□□□ -1.88
CCDC30-201ENST00000340612 NKAPLQ5M9Q1 402 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
CCDC30-201ENST00000340612 ABTB2Q8N961 1025 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 RBCK1Q9BYM8 510 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 NIF3L1Q9GZT8 377 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 GPAMQ9HCL2 828 aa3.3□□□□□ -1.88
CCDC30-201ENST00000340612 PDGFAP04085 211 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 C8orf34Q49A92 452 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 BICDL1Q6ZP65 573 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 C7orf43Q8WVR3 580 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 EDARADDQ8WWZ3 215 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 NUDT16Q96DE0 195 aaKnown RBP3.29□□□□□ -1.88
CCDC30-201ENST00000340612 TREHO43280 583 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 GPC1P35052 558 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 EHHADHQ08426 723 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 ARSJQ5FYB0 599 aaPredicted RBP3.29□□□□□ -1.88
CCDC30-201ENST00000340612 LRRC69Q6ZNQ3 347 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 SUSD3Q96L08 255 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 GGNBP2Q9H3C7 697 aa3.29□□□□□ -1.88
CCDC30-201ENST00000340612 MICAL2O94851 1124 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 ORC1Q13415 861 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 NBPF1Q3BBV0 1214 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 ALKBH2Q6NS38 261 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 FAM129BQ96TA1 746 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 A0A0U1RQG5 324 aaPredicted RBP3.28□□□□□ -1.88
CCDC30-201ENST00000340612 OPLAHO14841 1288 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 GATA4P43694 442 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 IDH3AP50213 366 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 FMR1Q06787 632 aaKnown RBP eCLIP3.28□□□□□ -1.88
CCDC30-201ENST00000340612 NEUROD1Q13562 356 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 ZNF326Q5BKZ1 582 aaKnown RBP3.28□□□□□ -1.88
CCDC30-201ENST00000340612 GJD3Q8N144 294 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 TRERF1Q96PN7 1200 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 GAS2L1Q99501 681 aaPredicted RBP3.28□□□□□ -1.88
CCDC30-201ENST00000340612 RUBCNLQ9H714 662 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 TIMMDC1Q9NPL8 285 aa3.28□□□□□ -1.88
CCDC30-201ENST00000340612 SPATA31C2B4DYI2 1134 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 TATP17735 454 aaPredicted RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 AMPD1P23109 780 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 MSX1P28360 303 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 MZF1P28698 734 aaPredicted RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 PLCB3Q01970 1234 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 DSC3Q14574 896 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 PRSS36Q5K4E3 855 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 C1orf53Q5VUE5 145 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 TPSG1Q9NRR2 321 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 HECW2Q9P2P5 1572 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 PNMA6FA0A0J9YX94 578 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 TGFBR3LH3BV60 316 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 GNB5O14775 395 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 DYRK3O43781 588 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 LDHBP07195 334 aaKnown RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 GRNP28799 593 aaKnown RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 TRIP4Q15650 581 aaPredicted RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 TSNAXIP1Q2TAA8 658 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 CMTR1Q8N1G2 835 aaKnown RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 GMCL1Q96IK5 515 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 ZIC5Q96T25 663 aa3.27□□□□□ -1.89
CCDC30-201ENST00000340612 DUSP9Q99956 384 aaKnown RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 DMGDHQ9UI17 866 aaKnown RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 ARID1BQ8NFD5 2236 aaPredicted RBP3.27□□□□□ -1.89
CCDC30-201ENST00000340612 RECKO95980 971 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 THBS1P07996 1170 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 ERICH6BQ5W0A0 696 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 USPL1Q5W0Q7 1092 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 ZDHHC3Q9NYG2 299 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 FOXD3Q9UJU5 478 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-201ENST00000340612 NSFL1CQ9UNZ2 370 aaKnown RBP3.26□□□□□ -1.89
CCDC30-201ENST00000340612 A0A1W2PNR3 127 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 HYAL3O43820 417 aaPredicted RBP3.26□□□□□ -1.89
CCDC30-201ENST00000340612 PDE3BQ13370 1112 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 PI16Q6UXB8 463 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 BTLAQ7Z6A9 289 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 DMRTB1Q96MA1 342 aa3.26□□□□□ -1.89
CCDC30-201ENST00000340612 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms