RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
CTSL-201ENST00000340342 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
CTSL-201ENST00000340342 CASP7P55210 303 aa17.99■□□□□ 0.47
CTSL-201ENST00000340342 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
CTSL-201ENST00000340342 TRIM27P14373 513 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 RASSF7Q02833 373 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 CC2D2BQ6DHV5 1058 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
CTSL-201ENST00000340342 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
CTSL-201ENST00000340342 GRM8O00222 908 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 PDE8AO60658 829 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 CCDC85AQ96PX6 553 aaPredicted RBP17.98■□□□□ 0.47
CTSL-201ENST00000340342 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
CTSL-201ENST00000340342 ABCC4O15439 1325 aa17.97■□□□□ 0.47
CTSL-201ENST00000340342 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
CTSL-201ENST00000340342 BBOX1O75936 387 aa17.97■□□□□ 0.47
CTSL-201ENST00000340342 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
CTSL-201ENST00000340342 OLFM4Q6UX06 510 aa17.97■□□□□ 0.47
CTSL-201ENST00000340342 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
CTSL-201ENST00000340342 CLUAP1Q96AJ1 413 aa17.97■□□□□ 0.47
CTSL-201ENST00000340342 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
CTSL-201ENST00000340342 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
CTSL-201ENST00000340342 NBPF7P0C2Y1 421 aaPredicted RBP17.96■□□□□ 0.47
CTSL-201ENST00000340342 PRELPP51888 382 aa17.96■□□□□ 0.47
CTSL-201ENST00000340342 CTSWP56202 376 aa17.96■□□□□ 0.47
CTSL-201ENST00000340342 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
CTSL-201ENST00000340342 DDX46Q7L014 1031 aaKnown RBP17.95■□□□□ 0.46
CTSL-201ENST00000340342 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
CTSL-201ENST00000340342 CCT4P50991 539 aaKnown RBP17.94■□□□□ 0.46
CTSL-201ENST00000340342 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSL-201ENST00000340342 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
CTSL-201ENST00000340342 ZNF526Q8TF50 670 aaPredicted RBP17.94■□□□□ 0.46
CTSL-201ENST00000340342 SEC31BQ9NQW1 1179 aa17.94■□□□□ 0.46
CTSL-201ENST00000340342 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
CTSL-201ENST00000340342 CCDC152Q4G0S7 254 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 CELF1Q92879 486 aaKnown RBP17.93■□□□□ 0.46
CTSL-201ENST00000340342 PLA2G12BQ9BX93 195 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 USP44Q9H0E7 712 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 UTYO14607 1347 aa17.93■□□□□ 0.46
CTSL-201ENST00000340342 GRAPQ13588 217 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
CTSL-201ENST00000340342 TMC4Q7Z404 712 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 GRAPLQ8TC17 118 aaPredicted RBP17.92■□□□□ 0.46
CTSL-201ENST00000340342 SUCLG2Q96I99 432 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 PSMD1Q99460 953 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 GREM2Q9H772 168 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
CTSL-201ENST00000340342 PLIN1O60240 522 aa17.91■□□□□ 0.46
CTSL-201ENST00000340342 RLBP1P12271 317 aa17.91■□□□□ 0.46
CTSL-201ENST00000340342 FOXO4P98177 505 aa17.91■□□□□ 0.46
CTSL-201ENST00000340342 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
CTSL-201ENST00000340342 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
CTSL-201ENST00000340342 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
CTSL-201ENST00000340342 DPY19L2Q6NUT2 758 aa17.9■□□□□ 0.46
CTSL-201ENST00000340342 TMEM57Q8N5G2 664 aa17.9■□□□□ 0.46
CTSL-201ENST00000340342 GLTPD2A6NH11 291 aa17.89■□□□□ 0.46
CTSL-201ENST00000340342 FTSJ3Q8IY81 847 aaKnown RBP17.89■□□□□ 0.46
CTSL-201ENST00000340342 DZIP1LQ8IYY4 767 aaKnown RBP17.89■□□□□ 0.46
CTSL-201ENST00000340342 MEIS3Q99687 375 aa17.89■□□□□ 0.46
CTSL-201ENST00000340342 CSF1RP07333 972 aa17.89■□□□□ 0.45
CTSL-201ENST00000340342 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.45
CTSL-201ENST00000340342 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
CTSL-201ENST00000340342 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
CTSL-201ENST00000340342 ZNF277Q9NRM2 450 aaPredicted RBP17.89■□□□□ 0.45
CTSL-201ENST00000340342 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
CTSL-201ENST00000340342 SNED1Q8TER0 1413 aa17.88■□□□□ 0.45
CTSL-201ENST00000340342 RTL9Q8NET4 1388 aa17.88■□□□□ 0.45
CTSL-201ENST00000340342 RPS8P62241 208 aaKnown RBP17.88■□□□□ 0.45
CTSL-201ENST00000340342 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
CTSL-201ENST00000340342 TIAM2Q8IVF5 1701 aa17.88■□□□□ 0.45
CTSL-201ENST00000340342 UBTFL1P0CB47 393 aaPredicted RBP17.87■□□□□ 0.45
CTSL-201ENST00000340342 ITGA6P23229 1130 aa17.87■□□□□ 0.45
CTSL-201ENST00000340342 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
CTSL-201ENST00000340342 KIF3CO14782 793 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 C1QTNF8P60827 252 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 MPNDQ8N594 471 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 SUPT20HQ8NEM7 779 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
CTSL-201ENST00000340342 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
CTSL-201ENST00000340342 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
CTSL-201ENST00000340342 JDP2Q8WYK2 163 aa17.85■□□□□ 0.45
CTSL-201ENST00000340342 RTFDC1Q9BY42 306 aaPredicted RBP17.85■□□□□ 0.45
CTSL-201ENST00000340342 NMRK2Q9NPI5 230 aa17.85■□□□□ 0.45
CTSL-201ENST00000340342 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
CTSL-201ENST00000340342 A0A1B0GUL6 1792 aa17.85■□□□□ 0.45
CTSL-201ENST00000340342 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
CTSL-201ENST00000340342 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms