RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
SRSF3-201ENST00000339436 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
SRSF3-201ENST00000339436 PLA2G12BQ9BX93 195 aa16.25■□□□□ 0.19
SRSF3-201ENST00000339436 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
SRSF3-201ENST00000339436 A0A1B0GUL6 1792 aa16.25■□□□□ 0.19
SRSF3-201ENST00000339436 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
SRSF3-201ENST00000339436 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
SRSF3-201ENST00000339436 CTSWP56202 376 aa16.24■□□□□ 0.19
SRSF3-201ENST00000339436 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
SRSF3-201ENST00000339436 UTYO14607 1347 aa16.24■□□□□ 0.19
SRSF3-201ENST00000339436 SNED1Q8TER0 1413 aa16.24■□□□□ 0.19
SRSF3-201ENST00000339436 LTBP1Q14766 1721 aa16.24■□□□□ 0.19
SRSF3-201ENST00000339436 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
SRSF3-201ENST00000339436 RTL9Q8NET4 1388 aa16.23■□□□□ 0.19
SRSF3-201ENST00000339436 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
SRSF3-201ENST00000339436 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
SRSF3-201ENST00000339436 C7orf43Q8WVR3 580 aa16.23■□□□□ 0.19
SRSF3-201ENST00000339436 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
SRSF3-201ENST00000339436 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
SRSF3-201ENST00000339436 C21orf2O43822 256 aa16.22■□□□□ 0.19
SRSF3-201ENST00000339436 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
SRSF3-201ENST00000339436 GRAPQ13588 217 aa16.22■□□□□ 0.19
SRSF3-201ENST00000339436 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
SRSF3-201ENST00000339436 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
SRSF3-201ENST00000339436 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
SRSF3-201ENST00000339436 TTLL11Q8NHH1 800 aa16.21■□□□□ 0.19
SRSF3-201ENST00000339436 USP44Q9H0E7 712 aa16.21■□□□□ 0.19
SRSF3-201ENST00000339436 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
SRSF3-201ENST00000339436 ARHGAP27Q6ZUM4 889 aa16.2■□□□□ 0.18
SRSF3-201ENST00000339436 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
SRSF3-201ENST00000339436 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
SRSF3-201ENST00000339436 GREM2Q9H772 168 aa16.2■□□□□ 0.18
SRSF3-201ENST00000339436 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
SRSF3-201ENST00000339436 DUOX1Q9NRD9 1551 aa16.2■□□□□ 0.18
SRSF3-201ENST00000339436 NFKBIEO00221 500 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 FOXO4P98177 505 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 SLC51AQ86UW1 340 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
SRSF3-201ENST00000339436 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
SRSF3-201ENST00000339436 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 BBOX1O75936 387 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 CSF1RP07333 972 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 EPHA10Q5JZY3 1008 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 SEC31BQ9NQW1 1179 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 ATP6V0A2Q9Y487 856 aa16.19■□□□□ 0.18
SRSF3-201ENST00000339436 LTBP3Q9NS15 1303 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 RLBP1P12271 317 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 RASSF7Q02833 373 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 DZIP1LQ8IYY4 767 aaKnown RBP16.18■□□□□ 0.18
SRSF3-201ENST00000339436 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
SRSF3-201ENST00000339436 CDC5LQ99459 802 aaKnown RBP16.17■□□□□ 0.18
SRSF3-201ENST00000339436 MEIS3Q99687 375 aa16.17■□□□□ 0.18
SRSF3-201ENST00000339436 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
SRSF3-201ENST00000339436 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
SRSF3-201ENST00000339436 RPS8P62241 208 aaKnown RBP16.16■□□□□ 0.18
SRSF3-201ENST00000339436 RABL6Q3YEC7 729 aaPredicted RBP16.16■□□□□ 0.18
SRSF3-201ENST00000339436 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
SRSF3-201ENST00000339436 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
SRSF3-201ENST00000339436 ITGA6P23229 1130 aa16.15■□□□□ 0.18
SRSF3-201ENST00000339436 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
SRSF3-201ENST00000339436 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
SRSF3-201ENST00000339436 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
SRSF3-201ENST00000339436 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
SRSF3-201ENST00000339436 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.18
SRSF3-201ENST00000339436 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.18
SRSF3-201ENST00000339436 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.18
SRSF3-201ENST00000339436 PLIN1O60240 522 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 MS4A1P11836 297 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 LMNB1P20700 586 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 PRELPP51888 382 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 IFIT5Q13325 482 aaKnown RBP16.14■□□□□ 0.17
SRSF3-201ENST00000339436 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 PSMD1Q99460 953 aa16.14■□□□□ 0.17
SRSF3-201ENST00000339436 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
SRSF3-201ENST00000339436 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
SRSF3-201ENST00000339436 GNAI3P08754 354 aa16.13■□□□□ 0.17
SRSF3-201ENST00000339436 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
SRSF3-201ENST00000339436 COL4A5P29400 1685 aa16.12■□□□□ 0.17
SRSF3-201ENST00000339436 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
SRSF3-201ENST00000339436 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
SRSF3-201ENST00000339436 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
SRSF3-201ENST00000339436 BSDC1Q9NW68 430 aaPredicted RBP16.12■□□□□ 0.17
SRSF3-201ENST00000339436 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
SRSF3-201ENST00000339436 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
SRSF3-201ENST00000339436 CCDC57Q2TAC2 916 aa16.11■□□□□ 0.17
SRSF3-201ENST00000339436 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
SRSF3-201ENST00000339436 PSME4Q14997 1843 aa16.1■□□□□ 0.17
SRSF3-201ENST00000339436 MPNDQ8N594 471 aa16.1■□□□□ 0.17
SRSF3-201ENST00000339436 RTFDC1Q9BY42 306 aaPredicted RBP16.1■□□□□ 0.17
SRSF3-201ENST00000339436 ZNF277Q9NRM2 450 aaPredicted RBP16.1■□□□□ 0.17
SRSF3-201ENST00000339436 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
SRSF3-201ENST00000339436 YY1P25490 414 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 GPSM2P81274 684 aa16.09■□□□□ 0.17
SRSF3-201ENST00000339436 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms