RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
PHF20-201ENST00000339089 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
PHF20-201ENST00000339089 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
PHF20-201ENST00000339089 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
PHF20-201ENST00000339089 FOXO4P98177 505 aa16.18■□□□□ 0.18
PHF20-201ENST00000339089 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
PHF20-201ENST00000339089 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
PHF20-201ENST00000339089 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
PHF20-201ENST00000339089 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
PHF20-201ENST00000339089 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
PHF20-201ENST00000339089 CSF1RP07333 972 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 CTSWP56202 376 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 CHD4Q14839 1912 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 RASSF7Q02833 373 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 GRAPQ13588 217 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
PHF20-201ENST00000339089 GRAPLQ8TC17 118 aaPredicted RBP16.17■□□□□ 0.18
PHF20-201ENST00000339089 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
PHF20-201ENST00000339089 INTS3Q68E01 1043 aaKnown RBP16.16■□□□□ 0.18
PHF20-201ENST00000339089 DDX46Q7L014 1031 aaKnown RBP16.16■□□□□ 0.18
PHF20-201ENST00000339089 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
PHF20-201ENST00000339089 GREM2Q9H772 168 aa16.16■□□□□ 0.18
PHF20-201ENST00000339089 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
PHF20-201ENST00000339089 SBF1O95248 1867 aa16.15■□□□□ 0.18
PHF20-201ENST00000339089 MYH3P11055 1940 aa16.15■□□□□ 0.18
PHF20-201ENST00000339089 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
PHF20-201ENST00000339089 SUCLG2Q96I99 432 aa16.15■□□□□ 0.18
PHF20-201ENST00000339089 BBOX1O75936 387 aa16.15■□□□□ 0.18
PHF20-201ENST00000339089 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
PHF20-201ENST00000339089 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
PHF20-201ENST00000339089 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
PHF20-201ENST00000339089 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
PHF20-201ENST00000339089 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
PHF20-201ENST00000339089 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
PHF20-201ENST00000339089 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
PHF20-201ENST00000339089 LTBP3Q9NS15 1303 aa16.14■□□□□ 0.17
PHF20-201ENST00000339089 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 RLBP1P12271 317 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 CCDC93Q567U6 631 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 CLUAP1Q96AJ1 413 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 RCAN3Q9UKA8 241 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
PHF20-201ENST00000339089 FAM161AQ3B820 660 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
PHF20-201ENST00000339089 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
PHF20-201ENST00000339089 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 DUOX1Q9NRD9 1551 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 MEIS3Q99687 375 aa16.11■□□□□ 0.17
PHF20-201ENST00000339089 LTBP1Q14766 1721 aa16.1■□□□□ 0.17
PHF20-201ENST00000339089 FKBP4Q02790 459 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHF20-201ENST00000339089 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
PHF20-201ENST00000339089 TAOK3Q9H2K8 898 aa16.1■□□□□ 0.17
PHF20-201ENST00000339089 BICC1Q9H694 974 aaKnown RBP16.1■□□□□ 0.17
PHF20-201ENST00000339089 COL4A5P29400 1685 aa16.1■□□□□ 0.17
PHF20-201ENST00000339089 ITGA6P23229 1130 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 PSMD1Q99460 953 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 CCDC88AQ3V6T2 1871 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 PLIN1O60240 522 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 LMNB1P20700 586 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 YY1P25490 414 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
PHF20-201ENST00000339089 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
PHF20-201ENST00000339089 ZNF277Q9NRM2 450 aaPredicted RBP16.08■□□□□ 0.16
PHF20-201ENST00000339089 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
PHF20-201ENST00000339089 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
PHF20-201ENST00000339089 GPSM2P81274 684 aa16.07■□□□□ 0.16
PHF20-201ENST00000339089 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
PHF20-201ENST00000339089 PANK1Q8TE04 598 aa16.07■□□□□ 0.16
PHF20-201ENST00000339089 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
PHF20-201ENST00000339089 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
PHF20-201ENST00000339089 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
PHF20-201ENST00000339089 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
PHF20-201ENST00000339089 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
PHF20-201ENST00000339089 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
PHF20-201ENST00000339089 MINPP1Q9UNW1 487 aa16.06■□□□□ 0.16
PHF20-201ENST00000339089 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
PHF20-201ENST00000339089 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
PHF20-201ENST00000339089 MPNDQ8N594 471 aa16.06■□□□□ 0.16
PHF20-201ENST00000339089 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
PHF20-201ENST00000339089 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
PHF20-201ENST00000339089 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
PHF20-201ENST00000339089 C20orf194Q5TEA3 1177 aa16.05■□□□□ 0.16
PHF20-201ENST00000339089 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
PHF20-201ENST00000339089 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
PHF20-201ENST00000339089 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 IARSP41252 1262 aaKnown RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 DPP8Q6V1X1 898 aaPredicted RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
PHF20-201ENST00000339089 GPR101Q96P66 508 aaPredicted RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
PHF20-201ENST00000339089 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
PHF20-201ENST00000339089 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
PHF20-201ENST00000339089 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
PHF20-201ENST00000339089 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms