RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C8orf34Q49A92 452 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 CAMKK2Q96RR4 588 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 GREM2Q9H772 168 aa18.18■□□□□ 0.5
CDK5RAP3-201ENST00000338399 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
CDK5RAP3-201ENST00000338399 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-201ENST00000338399 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-201ENST00000338399 GYS1P13807 737 aa18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 PDE1AP54750 535 aa18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 SF3B2Q13435 895 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 MX1P20591 662 aa18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 ITGA6P23229 1130 aa18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-201ENST00000338399 NFIXQ14938 502 aa18.15■□□□□ 0.5
CDK5RAP3-201ENST00000338399 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
CDK5RAP3-201ENST00000338399 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
CDK5RAP3-201ENST00000338399 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 EYA2O00167 538 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TFCP2Q12800 502 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 LRRC24Q50LG9 513 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 PUS3Q9BZE2 481 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CASZ1Q86V15 1759 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 GSPT1P15170 499 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 AACSQ86V21 672 aa18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-201ENST00000338399 MSH5O43196 834 aa18.13■□□□□ 0.49
CDK5RAP3-201ENST00000338399 BAG6P46379 1132 aa18.13■□□□□ 0.49
CDK5RAP3-201ENST00000338399 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-201ENST00000338399 STAP2Q9UGK3 403 aa18.13■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CARMIL3Q8ND23 1372 aa18.13■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CIAO1O76071 339 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 IL15P40933 162 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 DEFB132Q7Z7B7 95 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-201ENST00000338399 NPHP1O15259 732 aa18.11■□□□□ 0.49
CDK5RAP3-201ENST00000338399 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
CDK5RAP3-201ENST00000338399 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TM4SF1P30408 202 aa18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TNNI3KQ59H18 835 aa18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 FPGT-TNNI3KV9GXZ4 949 aa18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
CDK5RAP3-201ENST00000338399 RBM19Q9Y4C8 960 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 AOX1Q06278 1338 aa18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SF3B3Q15393 1217 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SLC15A2Q16348 729 aa18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
CDK5RAP3-201ENST00000338399 RTL9Q8NET4 1388 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 SERPINB2P05120 415 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CNBD1Q8NA66 436 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 NLRP3Q96P20 1036 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 STK32BQ9NY57 414 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.49
CDK5RAP3-201ENST00000338399 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.48
CDK5RAP3-201ENST00000338399 TAF1P21675 1872 aa18.08■□□□□ 0.48
CDK5RAP3-201ENST00000338399 SDSP20132 328 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 PI4K2BQ8TCG2 481 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 DDR1Q08345 913 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 GPR108Q9NPR9 543 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
CDK5RAP3-201ENST00000338399 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
CDK5RAP3-201ENST00000338399 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-201ENST00000338399 LRP5O75197 1615 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 POLRMTO00411 1230 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 SEC24BO95487 1268 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 TIMM10P62072 90 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 COL4A1P02462 1669 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 ERC2O15083 957 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 GLRX3O76003 335 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 DBNDD2Q9BQY9 259 aa18.05■□□□□ 0.48
CDK5RAP3-201ENST00000338399 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms