RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 DDX46Q7L014 1031 aaKnown RBP22.12■■□□□ 1.13
VSTM1-201ENST00000338372 CELF1Q92879 486 aaKnown RBP22.12■■□□□ 1.13
VSTM1-201ENST00000338372 CXCL9Q07325 125 aa22.11■■□□□ 1.13
VSTM1-201ENST00000338372 KIAA2012Q0VF49 1180 aa22.11■■□□□ 1.13
VSTM1-201ENST00000338372 EAPPQ56P03 285 aaPredicted RBP22.11■■□□□ 1.13
VSTM1-201ENST00000338372 PNMA8AQ86V59 439 aaPredicted RBP22.11■■□□□ 1.13
VSTM1-201ENST00000338372 MPNDQ8N594 471 aa22.11■■□□□ 1.13
VSTM1-201ENST00000338372 NIM1KQ8IY84 436 aa22.1■■□□□ 1.13
VSTM1-201ENST00000338372 GJA3Q9Y6H8 435 aa22.1■■□□□ 1.13
VSTM1-201ENST00000338372 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
VSTM1-201ENST00000338372 MAP1SQ66K74 1059 aaPredicted RBP22.09■■□□□ 1.13
VSTM1-201ENST00000338372 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
VSTM1-201ENST00000338372 WWC1Q8IX03 1113 aa22.09■■□□□ 1.13
VSTM1-201ENST00000338372 ZNRF3Q9ULT6 936 aa22.09■■□□□ 1.13
VSTM1-201ENST00000338372 YDJCA8MPS7 323 aa22.08■■□□□ 1.13
VSTM1-201ENST00000338372 IRS4O14654 1257 aaPredicted RBP22.08■■□□□ 1.13
VSTM1-201ENST00000338372 TMC4Q7Z404 712 aa22.08■■□□□ 1.13
VSTM1-201ENST00000338372 CNTROBQ8N137 903 aa22.08■■□□□ 1.13
VSTM1-201ENST00000338372 ZBTB38Q8NAP3 1195 aaPredicted RBP22.08■■□□□ 1.13
VSTM1-201ENST00000338372 SUPT20HQ8NEM7 779 aa22.08■■□□□ 1.13
VSTM1-201ENST00000338372 CNTNAP1P78357 1384 aa22.08■■□□□ 1.12
VSTM1-201ENST00000338372 TRPM7Q96QT4 1865 aa22.07■■□□□ 1.12
VSTM1-201ENST00000338372 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
VSTM1-201ENST00000338372 COL13A1Q5TAT6 717 aaPredicted RBP22.07■■□□□ 1.12
VSTM1-201ENST00000338372 RIC3Q7Z5B4 369 aa22.07■■□□□ 1.12
VSTM1-201ENST00000338372 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
VSTM1-201ENST00000338372 MYD88Q99836 296 aa22.06■■□□□ 1.12
VSTM1-201ENST00000338372 METTL22Q9BUU2 404 aaPredicted RBP22.06■■□□□ 1.12
VSTM1-201ENST00000338372 GPRC5DQ9NZD1 345 aa22.06■■□□□ 1.12
VSTM1-201ENST00000338372 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
VSTM1-201ENST00000338372 CLEC11AQ9Y240 323 aa22.06■■□□□ 1.12
VSTM1-201ENST00000338372 CACNA1FO60840 1977 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 TMEM88BA6NKF7 163 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 FMR1Q06787 632 aaKnown RBP eCLIP22.05■■□□□ 1.12
VSTM1-201ENST00000338372 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 CCDC30Q5VVM6 783 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 CCDC191Q8NCU4 936 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 POLLQ9UGP5 575 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 SCN9AQ15858 1988 aa22.05■■□□□ 1.12
VSTM1-201ENST00000338372 PCCAP05165 728 aaPredicted RBP22.04■■□□□ 1.12
VSTM1-201ENST00000338372 IGKV5-2P06315 115 aa22.04■■□□□ 1.12
VSTM1-201ENST00000338372 HSPA1AP0DMV8 641 aaKnown RBP22.04■■□□□ 1.12
VSTM1-201ENST00000338372 HSPA1BP0DMV9 641 aaKnown RBP22.04■■□□□ 1.12
VSTM1-201ENST00000338372 USP50Q70EL3 339 aaPredicted RBP22.04■■□□□ 1.12
VSTM1-201ENST00000338372 GPSM2P81274 684 aa22.03■■□□□ 1.12
VSTM1-201ENST00000338372 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
VSTM1-201ENST00000338372 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
VSTM1-201ENST00000338372 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
VSTM1-201ENST00000338372 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
VSTM1-201ENST00000338372 MYH3P11055 1940 aa22.03■■□□□ 1.12
VSTM1-201ENST00000338372 IL16Q14005 1332 aa22.03■■□□□ 1.12
VSTM1-201ENST00000338372 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
VSTM1-201ENST00000338372 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
VSTM1-201ENST00000338372 GMPSP49915 693 aaPredicted RBP22.02■■□□□ 1.12
VSTM1-201ENST00000338372 HIRAP54198 1017 aaPredicted RBP22.02■■□□□ 1.12
VSTM1-201ENST00000338372 RPS8P62241 208 aaKnown RBP22.02■■□□□ 1.12
VSTM1-201ENST00000338372 G2E3Q7L622 706 aa22.02■■□□□ 1.12
VSTM1-201ENST00000338372 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
VSTM1-201ENST00000338372 RASSF10A6NK89 507 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 RAD17O75943 681 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 VEGFBP49765 207 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 CIAPIN1Q6FI81 312 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 KSR2Q6VAB6 950 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 ADARB2Q9NS39 739 aaKnown RBP22.01■■□□□ 1.11
VSTM1-201ENST00000338372 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
VSTM1-201ENST00000338372 POLR2AP24928 1970 aaKnown RBP22.01■■□□□ 1.11
VSTM1-201ENST00000338372 SHTN1A0MZ66 631 aa22■■□□□ 1.11
VSTM1-201ENST00000338372 CST9Q5W186 159 aa22■■□□□ 1.11
VSTM1-201ENST00000338372 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
VSTM1-201ENST00000338372 PODXL2Q9NZ53 605 aa22■■□□□ 1.11
VSTM1-201ENST00000338372 NSFL1CQ9UNZ2 370 aaKnown RBP22■■□□□ 1.11
VSTM1-201ENST00000338372 CDHR2Q9BYE9 1310 aa22■■□□□ 1.11
VSTM1-201ENST00000338372 PSME4Q14997 1843 aa21.99■■□□□ 1.11
VSTM1-201ENST00000338372 PI4KAP2A4QPH2 592 aa21.99■■□□□ 1.11
VSTM1-201ENST00000338372 PI4KAP1Q8N8J0 262 aa21.99■■□□□ 1.11
VSTM1-201ENST00000338372 TBC1D16Q8TBP0 767 aa21.99■■□□□ 1.11
VSTM1-201ENST00000338372 KCNQ5Q9NR82 932 aa21.99■■□□□ 1.11
VSTM1-201ENST00000338372 PDE8AO60658 829 aa21.98■■□□□ 1.11
VSTM1-201ENST00000338372 WASHC4Q2M389 1173 aa21.98■■□□□ 1.11
VSTM1-201ENST00000338372 TWISTNBQ3B726 338 aaPredicted RBP21.98■■□□□ 1.11
VSTM1-201ENST00000338372 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
VSTM1-201ENST00000338372 RTL9Q8NET4 1388 aa21.98■■□□□ 1.11
VSTM1-201ENST00000338372 TRAF5O00463 557 aa21.97■■□□□ 1.11
VSTM1-201ENST00000338372 TNIP1Q15025 636 aa21.97■■□□□ 1.11
VSTM1-201ENST00000338372 GPR101Q96P66 508 aaPredicted RBP21.97■■□□□ 1.11
VSTM1-201ENST00000338372 CHMP4AQ9BY43 222 aa21.97■■□□□ 1.11
VSTM1-201ENST00000338372 THSD7BQ9C0I4 1608 aa21.96■■□□□ 1.11
VSTM1-201ENST00000338372 PSMD14O00487 310 aa21.96■■□□□ 1.11
VSTM1-201ENST00000338372 DDX58O95786 925 aaKnown RBP21.96■■□□□ 1.11
VSTM1-201ENST00000338372 TRPM4Q8TD43 1214 aa21.96■■□□□ 1.11
VSTM1-201ENST00000338372 DBNDD1Q9H9R9 158 aa21.96■■□□□ 1.11
VSTM1-201ENST00000338372 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
VSTM1-201ENST00000338372 ZNF646O15015 1829 aaPredicted RBP21.96■■□□□ 1.11
VSTM1-201ENST00000338372 SPEF2Q9C093 1822 aa21.95■■□□□ 1.1
VSTM1-201ENST00000338372 H7C1W4 665 aa21.95■■□□□ 1.1
VSTM1-201ENST00000338372 RIMBP2O15034 1052 aa21.95■■□□□ 1.1
VSTM1-201ENST00000338372 VAMP4O75379 141 aa21.95■■□□□ 1.1
VSTM1-201ENST00000338372 DPF2Q92785 391 aa21.95■■□□□ 1.1
VSTM1-201ENST00000338372 CNOT7Q9UIV1 285 aaKnown RBP21.95■■□□□ 1.1
VSTM1-201ENST00000338372 ZBTB12Q9Y330 459 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms