RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 RTL9Q8NET4 1388 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 MICALCLQ6ZW33 695 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 MCM10Q7L590 875 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 IMPG2Q9BZV3 1241 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 NUP88Q99567 741 aaPredicted RBP14.06□□□□□ -0.16
FN1-202ENST00000336916 GOLGA8AA7E2F4 631 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 IDI1Q13907 227 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 METAP2P50579 478 aaKnown RBP eCLIP14.06□□□□□ -0.16
FN1-202ENST00000336916 FERP16591 822 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 LMOD1P29536 600 aaPredicted RBP14.06□□□□□ -0.16
FN1-202ENST00000336916 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 EXOC1Q9NV70 894 aa14.06□□□□□ -0.16
FN1-202ENST00000336916 CEP83Q9Y592 693 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
FN1-202ENST00000336916 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
FN1-202ENST00000336916 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 KCNG4Q8TDN1 519 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
FN1-202ENST00000336916 C6orf50Q9HD87 102 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 IKBKGQ9Y6K9 419 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 SMC1AQ14683 1233 aaKnown RBP14.05□□□□□ -0.16
FN1-202ENST00000336916 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 UBA5Q9GZZ9 404 aa14.05□□□□□ -0.16
FN1-202ENST00000336916 SHTN1A0MZ66 631 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
FN1-202ENST00000336916 IFFO1Q0D2I5 559 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 RBM25P49756 843 aaKnown RBP14.04□□□□□ -0.16
FN1-202ENST00000336916 JDP2Q8WYK2 163 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 SSH1Q8WYL5 1049 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 ABCC2Q92887 1545 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 SPDYE3A6NKU9 549 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
FN1-202ENST00000336916 WTAPQ15007 396 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
FN1-202ENST00000336916 CEP128Q6ZU80 1094 aa14.04□□□□□ -0.16
FN1-202ENST00000336916 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.16
FN1-202ENST00000336916 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
FN1-202ENST00000336916 FLT4P35916 1363 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 MTIF2P46199 727 aaKnown RBP14.03□□□□□ -0.16
FN1-202ENST00000336916 CCDC14Q49A88 953 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 UBE3BQ7Z3V4 1068 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
FN1-202ENST00000336916 PPM1FP49593 454 aaPredicted RBP14.03□□□□□ -0.16
FN1-202ENST00000336916 SELENOOQ9BVL4 669 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
FN1-202ENST00000336916 PPP1R2P41236 205 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 SYNCQ9H7C4 482 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 TMOD4Q9NZQ9 345 aa14.03□□□□□ -0.16
FN1-202ENST00000336916 GNA11P29992 359 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 SPAG1Q07617 926 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 SKIDA1Q1XH10 827 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 AKAP4Q5JQC9 854 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 BICD1Q96G01 975 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 UBE2HP62256 183 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 PCDH11XQ9BZA7 1347 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 PCDH11YQ9BZA8 1340 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 ALDH1L1O75891 902 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 ATP6V1AP38606 617 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 DDB1Q16531 1140 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.16
FN1-202ENST00000336916 UHRF1BP1Q6BDS2 1440 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.17
FN1-202ENST00000336916 LRRC59Q96AG4 307 aaKnown RBP14.02□□□□□ -0.17
FN1-202ENST00000336916 COMMD10Q9Y6G5 202 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 GRM8O00222 908 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 TUBB4AP04350 444 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 STMN4Q9H169 189 aaPredicted RBP14.02□□□□□ -0.17
FN1-202ENST00000336916 MAST3O60307 1309 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 CCDC102BQ68D86 513 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 C19orf44Q9H6X5 657 aa14.02□□□□□ -0.17
FN1-202ENST00000336916 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 KRT13P13646 458 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 RBM26Q5T8P6 1007 aaKnown RBP14.01□□□□□ -0.17
FN1-202ENST00000336916 PRPF40BQ6NWY9 871 aaKnown RBP14.01□□□□□ -0.17
FN1-202ENST00000336916 CKAP4Q07065 602 aaKnown RBP14.01□□□□□ -0.17
FN1-202ENST00000336916 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 CCDC40Q4G0X9 1142 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 ZC3H12CQ9C0D7 883 aaKnown RBP14.01□□□□□ -0.17
FN1-202ENST00000336916 RASAL2Q9UJF2 1139 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 ACEP12821 1306 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 PARP3Q9Y6F1 533 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 SNX16P57768 344 aa14.01□□□□□ -0.17
FN1-202ENST00000336916 IL2RBP14784 551 aa14□□□□□ -0.17
FN1-202ENST00000336916 MCM4P33991 863 aa14□□□□□ -0.17
FN1-202ENST00000336916 ATL3Q6DD88 541 aa14□□□□□ -0.17
FN1-202ENST00000336916 NEK1Q96PY6 1258 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms