RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 NEUROD6Q96NK8 337 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 COL9A3Q14050 684 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 TTC6Q86TZ1 520 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 DACT1Q9NYF0 836 aa19.54■□□□□ 0.72
CDC42EP4-201ENST00000335793 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 ATP5J2-PTCD1G3V325 749 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 ANKLE2Q86XL3 938 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 ANKRD1Q15327 319 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
CDC42EP4-201ENST00000335793 LIG1P18858 919 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 IRX3P78415 501 aaPredicted RBP19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 MYRIPQ8NFW9 859 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 MAP4K1Q92918 833 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 TAF6LQ9Y6J9 622 aa19.52■□□□□ 0.72
CDC42EP4-201ENST00000335793 TRIM5Q9C035 493 aa19.52■□□□□ 0.71
CDC42EP4-201ENST00000335793 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 MTX1Q13505 466 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 CCDC129Q6ZRS4 1044 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 UBE3BQ7Z3V4 1068 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 ZNF589Q86UQ0 364 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 LUZP1Q86V48 1076 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 PIBF1Q8WXW3 757 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 KIF3AQ9Y496 699 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 RGPD1P0DJD0 1748 aa19.51■□□□□ 0.71
CDC42EP4-201ENST00000335793 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
CDC42EP4-201ENST00000335793 DDX46Q7L014 1031 aaKnown RBP19.5■□□□□ 0.71
CDC42EP4-201ENST00000335793 FBXW7Q969H0 707 aa19.5■□□□□ 0.71
CDC42EP4-201ENST00000335793 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP4-201ENST00000335793 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
CDC42EP4-201ENST00000335793 TRIM34Q9BYJ4 488 aa19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 JAK2O60674 1132 aa19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 CHGBP05060 677 aa19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 RPS6KB1P23443 525 aa19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 IL17RAQ96F46 866 aa19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 SEC62Q99442 399 aaKnown RBP19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 SCAND2PQ9GZW5 306 aaPredicted RBP19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
CDC42EP4-201ENST00000335793 TYRO3Q06418 890 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 AXIN2Q9Y2T1 843 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 HMGN5P82970 282 aaKnown RBP19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 ST3GAL1Q11201 340 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 TFCP2Q12800 502 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 NEK1Q96PY6 1258 aa19.48■□□□□ 0.71
CDC42EP4-201ENST00000335793 IGKV5-2P06315 115 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 A0A087WZG4 1122 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 Q6ZUG5 572 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 BRF1Q92994 677 aa19.47■□□□□ 0.71
CDC42EP4-201ENST00000335793 GCKRQ14397 625 aa19.46■□□□□ 0.71
CDC42EP4-201ENST00000335793 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
CDC42EP4-201ENST00000335793 PIK3C2AO00443 1686 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 NEURL1BA8MQ27 555 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 PTGS1P23219 599 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 ANKARQ7Z5J8 1434 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 CCT2P78371 535 aaKnown RBP19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 GOLGA6L19H0YKK7 550 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 DBNDD2Q9BQY9 259 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 PYCARDQ9ULZ3 195 aa19.45■□□□□ 0.7
CDC42EP4-201ENST00000335793 AP5Z1O43299 807 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 CCDC186Q7Z3E2 898 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 ZNF496Q96IT1 587 aaPredicted RBP19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 KRT32Q14532 448 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 DNAJC25Q9H1X3 360 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 NALCNQ8IZF0 1738 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 FMN2Q9NZ56 1722 aa19.44■□□□□ 0.7
CDC42EP4-201ENST00000335793 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 XRN1Q8IZH2 1706 aaKnown RBP19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 TAF5LO75529 589 aa19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 ZNF165P49910 485 aa19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 TAF3Q5VWG9 929 aa19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 DBNLQ9UJU6 430 aaKnown RBP19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 TOB2Q14106 344 aaPredicted RBP19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
CDC42EP4-201ENST00000335793 GOLIM4O00461 696 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 ZNF592Q92610 1267 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 PRIMPOLQ96LW4 560 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 BECN2A8MW95 431 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 NR1I2O75469 434 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 TNNI3KQ59H18 835 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 CHST3Q7LGC8 479 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 FPGT-TNNI3KV9GXZ4 949 aa19.42■□□□□ 0.7
CDC42EP4-201ENST00000335793 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms