RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 A1BGP04217 495 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 TFCP2Q12800 502 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
SF1-202ENST00000334944 C5P01031 1676 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 RIOK3O14730 519 aaKnown RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 TTC14Q96N46 770 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 RBM8AQ9Y5S9 174 aaKnown RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 BRINP3Q76B58 766 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 ZNF589Q86UQ0 364 aaPredicted RBP16.54■□□□□ 0.24
SF1-202ENST00000334944 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
SF1-202ENST00000334944 PIBF1Q8WXW3 757 aa16.53■□□□□ 0.24
SF1-202ENST00000334944 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
SF1-202ENST00000334944 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
SF1-202ENST00000334944 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
SF1-202ENST00000334944 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
SF1-202ENST00000334944 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
SF1-202ENST00000334944 DBNLQ9UJU6 430 aaKnown RBP16.53■□□□□ 0.24
SF1-202ENST00000334944 UTYO14607 1347 aa16.53■□□□□ 0.24
SF1-202ENST00000334944 NAA30Q147X3 362 aaPredicted RBP16.52■□□□□ 0.24
SF1-202ENST00000334944 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.24
SF1-202ENST00000334944 CCDC129Q6ZRS4 1044 aa16.52■□□□□ 0.24
SF1-202ENST00000334944 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
SF1-202ENST00000334944 PDRG1Q9NUG6 133 aa16.52■□□□□ 0.24
SF1-202ENST00000334944 LIMCH1Q9UPQ0 1083 aa16.52■□□□□ 0.24
SF1-202ENST00000334944 ALS2Q96Q42 1657 aa16.52■□□□□ 0.24
SF1-202ENST00000334944 PTPN12Q05209 780 aaKnown RBP16.52■□□□□ 0.23
SF1-202ENST00000334944 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.23
SF1-202ENST00000334944 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.23
SF1-202ENST00000334944 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.23
SF1-202ENST00000334944 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
SF1-202ENST00000334944 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
SF1-202ENST00000334944 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
SF1-202ENST00000334944 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
SF1-202ENST00000334944 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
SF1-202ENST00000334944 CREB3L3Q68CJ9 461 aa16.51■□□□□ 0.23
SF1-202ENST00000334944 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SF1-202ENST00000334944 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
SF1-202ENST00000334944 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
SF1-202ENST00000334944 ERICH4A6NGS2 130 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 SYT1P21579 422 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
SF1-202ENST00000334944 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 ADCY5O95622 1261 aa16.5■□□□□ 0.23
SF1-202ENST00000334944 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
SF1-202ENST00000334944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.231e-10■■■□□ 15.6
SF1-202ENST00000334944 STK3Q13188 491 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 TCHHQ07283 1943 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 KIF1AQ12756 1690 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 FIBPO43427 364 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 GTF2F1P35269 517 aaKnown RBP eCLIP16.49■□□□□ 0.23
SF1-202ENST00000334944 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
SF1-202ENST00000334944 ME3Q16798 604 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 TNNI3KQ59H18 835 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 FPGT-TNNI3KV9GXZ4 949 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 ZKSCAN1P17029 563 aaPredicted RBP16.49■□□□□ 0.23
SF1-202ENST00000334944 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
SF1-202ENST00000334944 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
SF1-202ENST00000334944 GJB2P29033 226 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 TIMM10P62072 90 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 PYCARDQ9ULZ3 195 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
SF1-202ENST00000334944 SLC27A2O14975 620 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
SF1-202ENST00000334944 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
SF1-202ENST00000334944 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 STX6O43752 255 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
SF1-202ENST00000334944 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
SF1-202ENST00000334944 EVA1CP58658 441 aa16.46■□□□□ 0.23
SF1-202ENST00000334944 ZSWIM6Q9HCJ5 1215 aa16.46■□□□□ 0.23
SF1-202ENST00000334944 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
SF1-202ENST00000334944 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
SF1-202ENST00000334944 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.23
SF1-202ENST00000334944 COL18A1P39060 1754 aa16.46■□□□□ 0.22
SF1-202ENST00000334944 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms