RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 NFAT5O94916 1531 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
HDAC6-201ENST00000334136 USP44Q9H0E7 712 aa14.06□□□□□ -0.16
HDAC6-201ENST00000334136 TNS2Q63HR2 1409 aa14.06□□□□□ -0.16
HDAC6-201ENST00000334136 VPS37CA5D8V6 355 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-201ENST00000334136 RHPN1Q8TCX5 695 aa14.06□□□□□ -0.16
HDAC6-201ENST00000334136 NSFL1CQ9UNZ2 370 aaKnown RBP14.06□□□□□ -0.16
HDAC6-201ENST00000334136 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-201ENST00000334136 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-201ENST00000334136 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.06□□□□□ -0.162e-7■■■■□ 22.1
HDAC6-201ENST00000334136 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 H0YIN7 160 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 MX1P20591 662 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 BRPF1P55201 1214 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 LRP2BPQ9P2M1 347 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 ABCC4O15439 1325 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 GLRX3O76003 335 aaKnown RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 ITGA6P23229 1130 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 ZNF771Q7L3S4 317 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
HDAC6-201ENST00000334136 BOLA2Q9H3K6 86 aa14.05□□□□□ -0.16
HDAC6-201ENST00000334136 PCCAP05165 728 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-201ENST00000334136 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 NBPF26B4DH59 902 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 ADRA2BP18089 450 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 ATP2B3Q16720 1220 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 NBPF10Q6P3W6 841 aaKnown RBP14.04□□□□□ -0.16
HDAC6-201ENST00000334136 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 NBPF15Q8N660 670 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 ARHGEF1Q92888 912 aaKnown RBP14.04□□□□□ -0.16
HDAC6-201ENST00000334136 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 IDH1O75874 414 aaKnown RBP14.04□□□□□ -0.16
HDAC6-201ENST00000334136 SERPINB2P05120 415 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 ITPK1Q13572 414 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 CLEC4GQ6UXB4 293 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
HDAC6-201ENST00000334136 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
HDAC6-201ENST00000334136 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 TOPAZ1Q8N9V7 1692 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 HIP1O00291 1037 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 TBC1D32Q96NH3 1257 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 CCDC39Q9UFE4 941 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 RABEP1Q15276 862 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 HLFQ16534 295 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-201ENST00000334136 COL15A1P39059 1388 aa14.03□□□□□ -0.16
HDAC6-201ENST00000334136 RC3H1Q5TC82 1133 aaKnown RBP14.02□□□□□ -0.16
HDAC6-201ENST00000334136 ANKRD26Q9UPS8 1709 aa14.02□□□□□ -0.16
HDAC6-201ENST00000334136 RBM5P52756 815 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC6-201ENST00000334136 ZSCAN30Q86W11 494 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 KDM6AO15550 1401 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-201ENST00000334136 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-201ENST00000334136 ZSCAN25Q6NSZ9 544 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 KLHDC4Q8TBB5 520 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
HDAC6-201ENST00000334136 AHDC1Q5TGY3 1603 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-201ENST00000334136 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 UQCRHP07919 91 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 SSFA2P28290 1259 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 PDE6BP35913 854 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 LINC00116Q8NCU8 138 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-201ENST00000334136 ZC3H12CQ9C0D7 883 aaKnown RBP14.01□□□□□ -0.17
HDAC6-201ENST00000334136 EYA2O00167 538 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 MMP10P09238 476 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 ZMYND15Q9H091 742 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 BECN2A8MW95 431 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 GOLGA6L19H0YKK7 550 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 TNNT3P45378 269 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-201ENST00000334136 GNL2Q13823 731 aaKnown RBP14.01□□□□□ -0.17
HDAC6-201ENST00000334136 EZH2Q15910 746 aaKnown RBP14.01□□□□□ -0.17
HDAC6-201ENST00000334136 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
HDAC6-201ENST00000334136 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
HDAC6-201ENST00000334136 ANKRD2Q9GZV1 360 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 SMC3Q9UQE7 1217 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 CTSWP56202 376 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 RNF20Q5VTR2 975 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 FIBPO43427 364 aa14□□□□□ -0.17
HDAC6-201ENST00000334136 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
HDAC6-201ENST00000334136 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
HDAC6-201ENST00000334136 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
HDAC6-201ENST00000334136 TRDNQ13061 729 aa13.99□□□□□ -0.17
HDAC6-201ENST00000334136 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-201ENST00000334136 SYCE3A1L190 88 aa13.99□□□□□ -0.17
HDAC6-201ENST00000334136 MBD3O95983 291 aa13.99□□□□□ -0.17
HDAC6-201ENST00000334136 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 TFCP2Q12800 502 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 SUSD4Q5VX71 490 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 CCDC125Q86Z20 511 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 SPC24Q8NBT2 197 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms