RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 RUFY2Q8WXA3 655 aa13.88□□□□□ -0.19
LIMK2-202ENST00000333611 TCHHQ07283 1943 aa13.88□□□□□ -0.19
LIMK2-202ENST00000333611 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
LIMK2-202ENST00000333611 CACTINQ8WUQ7 758 aaKnown RBP13.88□□□□□ -0.19
LIMK2-202ENST00000333611 FAM227BQ96M60 508 aa13.88□□□□□ -0.19
LIMK2-202ENST00000333611 GEMIN8Q9NWZ8 242 aaKnown RBP13.88□□□□□ -0.19
LIMK2-202ENST00000333611 CRB1P82279 1406 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 CWF19L2Q2TBE0 894 aaKnown RBP13.87□□□□□ -0.19
LIMK2-202ENST00000333611 NCAPGQ9BPX3 1015 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
LIMK2-202ENST00000333611 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 LGR6Q9HBX8 967 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 LIG1P18858 919 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 CLCN6P51797 869 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 CDC37L1Q7L3B6 337 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 DNAAF4Q8WXU2 420 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
LIMK2-202ENST00000333611 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
LIMK2-202ENST00000333611 ME3Q16798 604 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 PI4K2BQ8TCG2 481 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 GPATCH3Q96I76 525 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 A0A087WWV3 80 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 KRT85P78386 507 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 MCM6Q14566 821 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 DACT1Q9NYF0 836 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
LIMK2-202ENST00000333611 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 PNMA6AP0CW24 399 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 MAP3K11Q16584 847 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 ANKRD26Q9UPS8 1709 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 PDE6BP35913 854 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 SSH3Q8TE77 659 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 EDC3Q96F86 508 aaKnown RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-202ENST00000333611 PPP2R5AQ15172 486 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
LIMK2-202ENST00000333611 TTC6Q86TZ1 520 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 VPS18Q9P253 973 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 H3BQV1 296 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 SNW1Q13573 536 aaKnown RBP13.84□□□□□ -0.19
LIMK2-202ENST00000333611 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
LIMK2-202ENST00000333611 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 LRRN4CLQ8ND94 238 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 CDC42BPGQ6DT37 1551 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 A2ML1A8K2U0 1454 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 ZNF165P49910 485 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 TYRO3Q06418 890 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 FAM200AQ8TCP9 573 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 ECHDC1Q9NTX5 307 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 DNAI1Q9UI46 699 aa13.84□□□□□ -0.19
LIMK2-202ENST00000333611 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 BLOC1S2Q6QNY1 142 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 ZNF622Q969S3 477 aaKnown RBP eCLIP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 ZNF446Q9NWS9 450 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 FLT4P35916 1363 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 CTR9Q6PD62 1173 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
LIMK2-202ENST00000333611 TTC14Q96N46 770 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC69A6NI79 296 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 GOLIM4O00461 696 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
LIMK2-202ENST00000333611 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
LIMK2-202ENST00000333611 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 SMC2O95347 1197 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 PSEN1P49768 467 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 CREB3L3Q68CJ9 461 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms