RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 DNAJC2Q99543 621 aaKnown RBP20.65■□□□□ 0.9
PTP4A3-201ENST00000329397 RPS6KB1P23443 525 aa20.64■□□□□ 0.9
PTP4A3-201ENST00000329397 BRD2P25440 801 aaKnown RBP20.64■□□□□ 0.9
PTP4A3-201ENST00000329397 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
PTP4A3-201ENST00000329397 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 CEBPZQ03701 1054 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 NFATC2IPQ8NCF5 419 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 NUP62CLQ9H1M0 184 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 CCDC192P0DO97 292 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 PSMA5P28066 241 aa20.63■□□□□ 0.89
PTP4A3-201ENST00000329397 TYRO3Q06418 890 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 TFCP2Q12800 502 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 SPATA32Q96LK8 384 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 MED23Q9ULK4 1368 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 MRVI1Q9Y6F6 885 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 GCKRQ14397 625 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 ZNF790Q6PG37 636 aa20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
PTP4A3-201ENST00000329397 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 TAF5LO75529 589 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 MAP3K11Q16584 847 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 MYRIPQ8NFW9 859 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 PRDM4Q9UKN5 801 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 TULP1O00294 542 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 PTGS1P23219 599 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 RNF20Q5VTR2 975 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
PTP4A3-201ENST00000329397 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 ANO6Q4KMQ2 910 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 TNMDQ9H2S6 317 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 HIP1O00291 1037 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 NR1I2O75469 434 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 DBNDD2Q9BQY9 259 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
PTP4A3-201ENST00000329397 UTYO14607 1347 aa20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 DDX17Q92841 729 aaKnown RBP20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 A0A087WWV3 80 aa20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 LEO1Q8WVC0 666 aaPredicted RBP20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 FTOQ9C0B1 505 aaKnown RBP eCLIP20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
PTP4A3-201ENST00000329397 A0A0G2JLW4 131 aa20.58■□□□□ 0.89
PTP4A3-201ENST00000329397 LRMPQ12912 555 aa20.58■□□□□ 0.89
PTP4A3-201ENST00000329397 BICD2Q8TD16 824 aa20.58■□□□□ 0.89
PTP4A3-201ENST00000329397 BRF1Q92994 677 aa20.58■□□□□ 0.89
PTP4A3-201ENST00000329397 PGBD1Q96JS3 809 aa20.58■□□□□ 0.89
PTP4A3-201ENST00000329397 ZNF710Q8N1W2 664 aa20.58■□□□□ 0.88
PTP4A3-201ENST00000329397 FAM200AQ8TCP9 573 aa20.58■□□□□ 0.88
PTP4A3-201ENST00000329397 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 Q6ZUG5 572 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 C5P01031 1676 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 KIAA1524Q8TCG1 905 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 CBX8Q9HC52 389 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 PDCP20941 246 aa20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
PTP4A3-201ENST00000329397 ZNF609O15014 1411 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 CYP21A2P08686 494 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 DNAJC25Q9H1X3 360 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 CHD2O14647 1828 aaKnown RBP20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 NCAPD2Q15021 1401 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 NEK1Q96PY6 1258 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 SPTLC3Q9NUV7 552 aa20.56■□□□□ 0.88
PTP4A3-201ENST00000329397 ANKRD1Q15327 319 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 ANKRD13DQ6ZTN6 518 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 DRC7Q8IY82 874 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 METTL22Q9BUU2 404 aaPredicted RBP20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
PTP4A3-201ENST00000329397 KDM6AO15550 1401 aaPredicted RBP20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 STOX1Q6ZVD7 989 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 CCDC186Q7Z3E2 898 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 ERBB3P21860 1342 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 H3BQV1 296 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 RFX5P48382 616 aaPredicted RBP20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 IFFO2Q5TF58 517 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 NPHP3Q7Z494 1330 aa20.54■□□□□ 0.88
PTP4A3-201ENST00000329397 CABLES1Q8TDN4 633 aa20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 SCAND2PQ9GZW5 306 aaPredicted RBP20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 ELP1O95163 1332 aa20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 A0A087WZG4 1122 aa20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 CCT2P78371 535 aaKnown RBP20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 GUCY1B3Q02153 619 aa20.53■□□□□ 0.88
PTP4A3-201ENST00000329397 SCRN1Q12765 414 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms