RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CACNA1FO60840 1977 aa35.3■■■■□ 3.24
ATPAF1-201ENST00000329231 VEGFAP15692 232 aaPredicted RBP35.27■■■■□ 3.24
ATPAF1-201ENST00000329231 SLC51AQ86UW1 340 aa35.27■■■■□ 3.24
ATPAF1-201ENST00000329231 DNAAF4Q8WXU2 420 aa35.27■■■■□ 3.24
ATPAF1-201ENST00000329231 NEURL1BA8MQ27 555 aa35.26■■■■□ 3.24
ATPAF1-201ENST00000329231 PDE8AO60658 829 aa35.26■■■■□ 3.24
ATPAF1-201ENST00000329231 JDP2Q8WYK2 163 aa35.26■■■■□ 3.24
ATPAF1-201ENST00000329231 CWF19L2Q2TBE0 894 aaKnown RBP35.25■■■■□ 3.23
ATPAF1-201ENST00000329231 JARID2Q92833 1246 aaPredicted RBP35.25■■■■□ 3.23
ATPAF1-201ENST00000329231 CDHR2Q9BYE9 1310 aa35.25■■■■□ 3.23
ATPAF1-201ENST00000329231 SUPT20HQ8NEM7 779 aa35.24■■■■□ 3.23
ATPAF1-201ENST00000329231 SLFN5Q08AF3 891 aa35.23■■■■□ 3.23
ATPAF1-201ENST00000329231 CCDC152Q4G0S7 254 aa35.23■■■■□ 3.23
ATPAF1-201ENST00000329231 RBM46Q8TBY0 533 aaKnown RBP35.23■■■■□ 3.23
ATPAF1-201ENST00000329231 CELF1Q92879 486 aaKnown RBP35.23■■■■□ 3.23
ATPAF1-201ENST00000329231 DDNO94850 711 aaPredicted RBP35.22■■■■□ 3.23
ATPAF1-201ENST00000329231 DPP8Q6V1X1 898 aaPredicted RBP35.22■■■■□ 3.23
ATPAF1-201ENST00000329231 MPNDQ8N594 471 aa35.22■■■■□ 3.23
ATPAF1-201ENST00000329231 VPS33BQ9H267 617 aa35.22■■■■□ 3.23
ATPAF1-201ENST00000329231 FZD9O00144 591 aa35.21■■■■□ 3.23
ATPAF1-201ENST00000329231 MIER1Q8N108 512 aa35.21■■■■□ 3.23
ATPAF1-201ENST00000329231 LARGE2Q8N3Y3 721 aa35.21■■■■□ 3.23
ATPAF1-201ENST00000329231 LINS1Q8NG48 757 aa35.21■■■■□ 3.23
ATPAF1-201ENST00000329231 RTFDC1Q9BY42 306 aaPredicted RBP35.21■■■■□ 3.23
ATPAF1-201ENST00000329231 WDR90Q96KV7 1748 aa35.2■■■■□ 3.23
ATPAF1-201ENST00000329231 RPS8P62241 208 aaKnown RBP35.19■■■■□ 3.22
ATPAF1-201ENST00000329231 GCKRQ14397 625 aa35.19■■■■□ 3.22
ATPAF1-201ENST00000329231 ZNF541Q9H0D2 1346 aa35.18■■■■□ 3.22
ATPAF1-201ENST00000329231 PPIP5K2O43314 1243 aa35.18■■■■□ 3.22
ATPAF1-201ENST00000329231 TAF1P21675 1872 aa35.18■■■■□ 3.22
ATPAF1-201ENST00000329231 POTECB2RU33 542 aa35.17■■■■□ 3.22
ATPAF1-201ENST00000329231 H7C1W4 665 aa35.17■■■■□ 3.22
ATPAF1-201ENST00000329231 UBE3BQ7Z3V4 1068 aa35.16■■■■□ 3.22
ATPAF1-201ENST00000329231 NIM1KQ8IY84 436 aa35.16■■■■□ 3.22
ATPAF1-201ENST00000329231 CDCA7LQ96GN5 454 aa35.16■■■■□ 3.22
ATPAF1-201ENST00000329231 SEC31BQ9NQW1 1179 aa35.16■■■■□ 3.22
ATPAF1-201ENST00000329231 F6X3S4 739 aa35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 HSPA6P17066 643 aa35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 CTSWP56202 376 aa35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 EIF6P56537 245 aaKnown RBP35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 FSTL1Q12841 308 aa35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 L3MBTL3Q96JM7 780 aaPredicted RBP35.15■■■■□ 3.22
ATPAF1-201ENST00000329231 AOC3Q16853 763 aa35.14■■■■□ 3.22
ATPAF1-201ENST00000329231 CCDC85AQ96PX6 553 aaPredicted RBP35.14■■■■□ 3.22
ATPAF1-201ENST00000329231 IQCA1LA6NCM1 817 aa35.13■■■■□ 3.21
ATPAF1-201ENST00000329231 BEND3Q5T5X7 828 aa35.12■■■■□ 3.21
ATPAF1-201ENST00000329231 GPC2Q8N158 579 aa35.12■■■■□ 3.21
ATPAF1-201ENST00000329231 SMC1BQ8NDV3 1235 aa35.12■■■■□ 3.21
ATPAF1-201ENST00000329231 NSFL1CQ9UNZ2 370 aaKnown RBP35.12■■■■□ 3.21
ATPAF1-201ENST00000329231 LRRC37AA6NMS7 1700 aa35.12■■■■□ 3.21
ATPAF1-201ENST00000329231 COL4A5P29400 1685 aa35.11■■■■□ 3.21
ATPAF1-201ENST00000329231 TRMT2AQ8IZ69 625 aaKnown RBP35.11■■■■□ 3.21
ATPAF1-201ENST00000329231 TTLL11Q8NHH1 800 aa35.11■■■■□ 3.21
ATPAF1-201ENST00000329231 KIAA2012Q0VF49 1180 aa35.1■■■■□ 3.21
ATPAF1-201ENST00000329231 PLA2G12BQ9BX93 195 aa35.1■■■■□ 3.21
ATPAF1-201ENST00000329231 ANKRD18AQ8IVF6 992 aa35.09■■■■□ 3.21
ATPAF1-201ENST00000329231 MRPL50Q8N5N7 158 aaKnown RBP35.09■■■■□ 3.21
ATPAF1-201ENST00000329231 CDC5LQ99459 802 aaKnown RBP35.09■■■■□ 3.21
ATPAF1-201ENST00000329231 COL4A1P02462 1669 aa35.08■■■■□ 3.21
ATPAF1-201ENST00000329231 CASP7P55210 303 aa35.08■■■■□ 3.21
ATPAF1-201ENST00000329231 GPSM2P81274 684 aa35.07■■■■□ 3.2
ATPAF1-201ENST00000329231 ZNRF3Q9ULT6 936 aa35.07■■■■□ 3.2
ATPAF1-201ENST00000329231 RTL9Q8NET4 1388 aa35.07■■■■□ 3.2
ATPAF1-201ENST00000329231 GREM2Q9H772 168 aa35.06■■■■□ 3.2
ATPAF1-201ENST00000329231 GJA3Q9Y6H8 435 aa35.06■■■■□ 3.2
ATPAF1-201ENST00000329231 C6orf229H3BNL8 230 aa35.05■■■■□ 3.2
ATPAF1-201ENST00000329231 SLC4A10Q6U841 1118 aa35.05■■■■□ 3.2
ATPAF1-201ENST00000329231 SSH1Q8WYL5 1049 aa35.05■■■■□ 3.2
ATPAF1-201ENST00000329231 HACL1Q9UJ83 578 aa35.05■■■■□ 3.2
ATPAF1-201ENST00000329231 DUOX1Q9NRD9 1551 aa35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 ALDH1L1O75891 902 aa35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 CT47B1P0C2W7 299 aaPredicted RBP35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 WASHC4Q2M389 1173 aa35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 ALDH1L2Q3SY69 923 aa35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 PTPRCP08575 1304 aa35.04■■■■□ 3.2
ATPAF1-201ENST00000329231 EYA3Q99504 573 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 SRCIN1Q9C0H9 1055 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 TAF1DQ9H5J8 278 aaPredicted RBP35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 PODXL2Q9NZ53 605 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 ANKIB1Q9P2G1 1089 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 POLLQ9UGP5 575 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 SCN4AP35499 1836 aa35.03■■■■□ 3.2
ATPAF1-201ENST00000329231 MYH3P11055 1940 aa35.02■■■■□ 3.2
ATPAF1-201ENST00000329231 APLP1P51693 650 aa35.02■■■■□ 3.2
ATPAF1-201ENST00000329231 TBC1D16Q8TBP0 767 aa35.01■■■■□ 3.2
ATPAF1-201ENST00000329231 GRM8O00222 908 aa35■■■■□ 3.19
ATPAF1-201ENST00000329231 CSF1RP07333 972 aa35■■■■□ 3.19
ATPAF1-201ENST00000329231 BSDC1Q9NW68 430 aaPredicted RBP35■■■■□ 3.19
ATPAF1-201ENST00000329231 C9orf78Q9NZ63 289 aaPredicted RBP35■■■■□ 3.19
ATPAF1-201ENST00000329231 CXCL9Q07325 125 aa34.99■■■■□ 3.19
ATPAF1-201ENST00000329231 BCL2L13Q9BXK5 485 aa34.99■■■■□ 3.19
ATPAF1-201ENST00000329231 GGA1Q9UJY5 639 aa34.99■■■■□ 3.19
ATPAF1-201ENST00000329231 LMOD1P29536 600 aaPredicted RBP34.98■■■■□ 3.19
ATPAF1-201ENST00000329231 EPHX2P34913 555 aa34.98■■■■□ 3.19
ATPAF1-201ENST00000329231 RIMBP2O15034 1052 aa34.97■■■■□ 3.19
ATPAF1-201ENST00000329231 UFL1O94874 794 aa34.97■■■■□ 3.19
ATPAF1-201ENST00000329231 ITGA6P23229 1130 aa34.97■■■■□ 3.19
ATPAF1-201ENST00000329231 IGHMBP2P38935 993 aaKnown RBP34.97■■■■□ 3.19
ATPAF1-201ENST00000329231 SMC4Q9NTJ3 1288 aa34.97■■■■□ 3.19
ATPAF1-201ENST00000329231 XDHP47989 1333 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms