RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 SOGA3Q5TF21 947 aa19.63■□□□□ 0.73
TSFM-201ENST00000323833 C9orf131Q5VYM1 1079 aa19.63■□□□□ 0.73
TSFM-201ENST00000323833 HSP90B1P14625 803 aaKnown RBP19.62■□□□□ 0.73
TSFM-201ENST00000323833 CCDC93Q567U6 631 aa19.62■□□□□ 0.73
TSFM-201ENST00000323833 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
TSFM-201ENST00000323833 SRCIN1Q9C0H9 1055 aa19.62■□□□□ 0.73
TSFM-201ENST00000323833 RNF181Q9P0P0 153 aa19.62■□□□□ 0.73
TSFM-201ENST00000323833 NOB1Q9ULX3 412 aaKnown RBP19.62■□□□□ 0.73
TSFM-201ENST00000323833 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
TSFM-201ENST00000323833 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
TSFM-201ENST00000323833 CASP7P55210 303 aa19.61■□□□□ 0.73
TSFM-201ENST00000323833 GRAPQ13588 217 aa19.61■□□□□ 0.73
TSFM-201ENST00000323833 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
TSFM-201ENST00000323833 SNED1Q8TER0 1413 aa19.6■□□□□ 0.73
TSFM-201ENST00000323833 BCAR3O75815 825 aa19.6■□□□□ 0.73
TSFM-201ENST00000323833 ALDH1L1O75891 902 aa19.6■□□□□ 0.73
TSFM-201ENST00000323833 CELF1Q92879 486 aaKnown RBP19.6■□□□□ 0.73
TSFM-201ENST00000323833 TAOK3Q9H2K8 898 aa19.6■□□□□ 0.73
TSFM-201ENST00000323833 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
TSFM-201ENST00000323833 BBOX1O75936 387 aa19.59■□□□□ 0.73
TSFM-201ENST00000323833 LMNB1P20700 586 aa19.59■□□□□ 0.73
TSFM-201ENST00000323833 CTSWP56202 376 aa19.59■□□□□ 0.73
TSFM-201ENST00000323833 CCDC152Q4G0S7 254 aa19.59■□□□□ 0.73
TSFM-201ENST00000323833 RTKN2Q8IZC4 609 aa19.59■□□□□ 0.73
TSFM-201ENST00000323833 LTBP3Q9NS15 1303 aa19.58■□□□□ 0.73
TSFM-201ENST00000323833 GRM8O00222 908 aa19.58■□□□□ 0.72
TSFM-201ENST00000323833 ZNF784Q8NCA9 323 aaPredicted RBP19.58■□□□□ 0.72
TSFM-201ENST00000323833 TTLL11Q8NHH1 800 aa19.58■□□□□ 0.72
TSFM-201ENST00000323833 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
TSFM-201ENST00000323833 ATP6V0A2Q9Y487 856 aa19.58■□□□□ 0.72
TSFM-201ENST00000323833 FKBP4Q02790 459 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSFM-201ENST00000323833 CC2D2BQ6DHV5 1058 aa19.57■□□□□ 0.72
TSFM-201ENST00000323833 SP8Q8IXZ3 490 aa19.57■□□□□ 0.72
TSFM-201ENST00000323833 PLA2G12BQ9BX93 195 aa19.57■□□□□ 0.72
TSFM-201ENST00000323833 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
TSFM-201ENST00000323833 API5Q9BZZ5 524 aaKnown RBP19.56■□□□□ 0.72
TSFM-201ENST00000323833 ZNF277Q9NRM2 450 aaPredicted RBP19.56■□□□□ 0.72
TSFM-201ENST00000323833 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
TSFM-201ENST00000323833 FRAT1Q92837 279 aaPredicted RBP19.55■□□□□ 0.72
TSFM-201ENST00000323833 TMX4Q9H1E5 349 aaPredicted RBP19.55■□□□□ 0.72
TSFM-201ENST00000323833 GREM2Q9H772 168 aa19.55■□□□□ 0.72
TSFM-201ENST00000323833 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
TSFM-201ENST00000323833 NBPF7P0C2Y1 421 aaPredicted RBP19.54■□□□□ 0.72
TSFM-201ENST00000323833 FOXO4P98177 505 aa19.54■□□□□ 0.72
TSFM-201ENST00000323833 ZNF526Q8TF50 670 aaPredicted RBP19.54■□□□□ 0.72
TSFM-201ENST00000323833 PSMD1Q99460 953 aa19.54■□□□□ 0.72
TSFM-201ENST00000323833 TNNQ9UQP3 1299 aa19.54■□□□□ 0.72
TSFM-201ENST00000323833 CSF1RP07333 972 aa19.53■□□□□ 0.72
TSFM-201ENST00000323833 EPHA10Q5JZY3 1008 aa19.53■□□□□ 0.72
TSFM-201ENST00000323833 TMC4Q7Z404 712 aa19.53■□□□□ 0.72
TSFM-201ENST00000323833 ARHGAP45Q92619 1136 aa19.53■□□□□ 0.72
TSFM-201ENST00000323833 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
TSFM-201ENST00000323833 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
TSFM-201ENST00000323833 GRIPAP1Q4V328 841 aa19.52■□□□□ 0.72
TSFM-201ENST00000323833 MPNDQ8N594 471 aa19.52■□□□□ 0.72
TSFM-201ENST00000323833 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
TSFM-201ENST00000323833 RTL9Q8NET4 1388 aa19.52■□□□□ 0.72
TSFM-201ENST00000323833 DUOX1Q9NRD9 1551 aa19.52■□□□□ 0.71
TSFM-201ENST00000323833 A0A1B0GUL6 1792 aa19.52■□□□□ 0.71
TSFM-201ENST00000323833 UTYO14607 1347 aa19.51■□□□□ 0.71
TSFM-201ENST00000323833 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
TSFM-201ENST00000323833 IARSP41252 1262 aaKnown RBP19.51■□□□□ 0.71
TSFM-201ENST00000323833 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
TSFM-201ENST00000323833 DPP8Q6V1X1 898 aaPredicted RBP19.51■□□□□ 0.71
TSFM-201ENST00000323833 ANKRD18AQ8IVF6 992 aa19.51■□□□□ 0.71
TSFM-201ENST00000323833 USP44Q9H0E7 712 aa19.51■□□□□ 0.71
TSFM-201ENST00000323833 COL4A5P29400 1685 aa19.51■□□□□ 0.71
TSFM-201ENST00000323833 TRIM27P14373 513 aa19.5■□□□□ 0.71
TSFM-201ENST00000323833 ITGA6P23229 1130 aa19.5■□□□□ 0.71
TSFM-201ENST00000323833 LMBR1LQ6UX01 489 aa19.5■□□□□ 0.71
TSFM-201ENST00000323833 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
TSFM-201ENST00000323833 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
TSFM-201ENST00000323833 CHMP3Q9Y3E7 222 aa19.5■□□□□ 0.71
TSFM-201ENST00000323833 GPSM2P81274 684 aa19.49■□□□□ 0.71
TSFM-201ENST00000323833 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
TSFM-201ENST00000323833 CLUAP1Q96AJ1 413 aa19.49■□□□□ 0.71
TSFM-201ENST00000323833 NSFL1CQ9UNZ2 370 aaKnown RBP19.49■□□□□ 0.71
TSFM-201ENST00000323833 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
TSFM-201ENST00000323833 ZKSCAN2Q63HK3 967 aa19.48■□□□□ 0.71
TSFM-201ENST00000323833 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
TSFM-201ENST00000323833 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
TSFM-201ENST00000323833 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
TSFM-201ENST00000323833 AOC3Q16853 763 aa19.47■□□□□ 0.71
TSFM-201ENST00000323833 BICC1Q9H694 974 aaKnown RBP19.47■□□□□ 0.71
TSFM-201ENST00000323833 PPIP5K2O43314 1243 aa19.46■□□□□ 0.71
TSFM-201ENST00000323833 IGHMBP2P38935 993 aaKnown RBP19.46■□□□□ 0.71
TSFM-201ENST00000323833 IFIT5Q13325 482 aaKnown RBP19.46■□□□□ 0.71
TSFM-201ENST00000323833 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
TSFM-201ENST00000323833 LARGE2Q8N3Y3 721 aa19.46■□□□□ 0.71
TSFM-201ENST00000323833 SUPT20HQ8NEM7 779 aa19.46■□□□□ 0.71
TSFM-201ENST00000323833 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
TSFM-201ENST00000323833 ANKRD44Q8N8A2 993 aa19.45■□□□□ 0.7
TSFM-201ENST00000323833 GPR101Q96P66 508 aaPredicted RBP19.45■□□□□ 0.7
TSFM-201ENST00000323833 ANKIB1Q9P2G1 1089 aa19.45■□□□□ 0.7
TSFM-201ENST00000323833 POLLQ9UGP5 575 aa19.45■□□□□ 0.7
TSFM-201ENST00000323833 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
TSFM-201ENST00000323833 C6orf229H3BNL8 230 aa19.44■□□□□ 0.7
TSFM-201ENST00000323833 CCDC57Q2TAC2 916 aa19.44■□□□□ 0.7
TSFM-201ENST00000323833 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
TSFM-201ENST00000323833 JDP2Q8WYK2 163 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms