RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
VRK3-201ENST00000316763 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
VRK3-201ENST00000316763 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
VRK3-201ENST00000316763 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
VRK3-201ENST00000316763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
VRK3-201ENST00000316763 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
VRK3-201ENST00000316763 HLFQ16534 295 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
VRK3-201ENST00000316763 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
VRK3-201ENST00000316763 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
VRK3-201ENST00000316763 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
VRK3-201ENST00000316763 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
VRK3-201ENST00000316763 CHMLP26374 656 aa17.2■□□□□ 0.34
VRK3-201ENST00000316763 SSFA2P28290 1259 aa17.2■□□□□ 0.34
VRK3-201ENST00000316763 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
VRK3-201ENST00000316763 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
VRK3-201ENST00000316763 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
VRK3-201ENST00000316763 MCM2P49736 904 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
VRK3-201ENST00000316763 ADRA2BP18089 450 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 ANAPC15P60006 121 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
VRK3-201ENST00000316763 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
VRK3-201ENST00000316763 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
VRK3-201ENST00000316763 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
VRK3-201ENST00000316763 NUP98P52948 1817 aa17.18■□□□□ 0.34
VRK3-201ENST00000316763 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
VRK3-201ENST00000316763 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 RFC4P35249 363 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
VRK3-201ENST00000316763 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
VRK3-201ENST00000316763 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
VRK3-201ENST00000316763 MRE11P49959 708 aa17.16■□□□□ 0.34
VRK3-201ENST00000316763 FOXO4P98177 505 aa17.16■□□□□ 0.34
VRK3-201ENST00000316763 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
VRK3-201ENST00000316763 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
VRK3-201ENST00000316763 ANO2Q9NQ90 1003 aa17.16■□□□□ 0.34
VRK3-201ENST00000316763 BCORQ6W2J9 1755 aa17.16■□□□□ 0.34
VRK3-201ENST00000316763 RGL2O15211 777 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 ZPR1O75312 459 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 NEK4P51957 841 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 BAG4O95429 457 aaKnown RBP17.15■□□□□ 0.34
VRK3-201ENST00000316763 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
VRK3-201ENST00000316763 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
VRK3-201ENST00000316763 USP42Q9H9J4 1324 aaKnown RBP17.14■□□□□ 0.34
VRK3-201ENST00000316763 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
VRK3-201ENST00000316763 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
VRK3-201ENST00000316763 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
VRK3-201ENST00000316763 UBN2Q6ZU65 1347 aa17.14■□□□□ 0.33
VRK3-201ENST00000316763 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
VRK3-201ENST00000316763 GPTP24298 496 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
VRK3-201ENST00000316763 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
VRK3-201ENST00000316763 ANKRD36CQ5JPF3 1778 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
VRK3-201ENST00000316763 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 ERC1Q8IUD2 1116 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
VRK3-201ENST00000316763 TTC41PQ6P2S7 1318 aa17.13■□□□□ 0.33
VRK3-201ENST00000316763 SOCS7O14512 581 aa17.12■□□□□ 0.33
VRK3-201ENST00000316763 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
VRK3-201ENST00000316763 PI4K2BQ8TCG2 481 aa17.12■□□□□ 0.33
VRK3-201ENST00000316763 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
VRK3-201ENST00000316763 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
VRK3-201ENST00000316763 GYS1P13807 737 aa17.11■□□□□ 0.33
VRK3-201ENST00000316763 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
VRK3-201ENST00000316763 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
VRK3-201ENST00000316763 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
VRK3-201ENST00000316763 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
VRK3-201ENST00000316763 CLASRPQ8N2M8 674 aaKnown RBP17.11■□□□□ 0.33
VRK3-201ENST00000316763 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
VRK3-201ENST00000316763 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
VRK3-201ENST00000316763 KLHL40Q2TBA0 621 aa17.1■□□□□ 0.33
VRK3-201ENST00000316763 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
VRK3-201ENST00000316763 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
VRK3-201ENST00000316763 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
VRK3-201ENST00000316763 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
VRK3-201ENST00000316763 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
VRK3-201ENST00000316763 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
VRK3-201ENST00000316763 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
VRK3-201ENST00000316763 CSF1RP07333 972 aa17.09■□□□□ 0.33
VRK3-201ENST00000316763 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
VRK3-201ENST00000316763 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
VRK3-201ENST00000316763 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.33
VRK3-201ENST00000316763 SASH1O94885 1247 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms