RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CCZ1BP86790 482 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 CCZ1P86791 482 aaPredicted RBP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 MRFAP1L1Q96HT8 127 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 NEMFO60524 1076 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 CCDC9Q9Y3X0 531 aaKnown RBP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 PEAK1Q9H792 1746 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 RESTQ13127 1097 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
COL6A2-202ENST00000310645 LRRN4CLQ8ND94 238 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
COL6A2-202ENST00000310645 CDC25BP30305 580 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
COL6A2-202ENST00000310645 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 SMC2O95347 1197 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
COL6A2-202ENST00000310645 Q6ZUG5 572 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 C3P01024 1663 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
COL6A2-202ENST00000310645 ME1P48163 572 aa17.21■□□□□ 0.34
COL6A2-202ENST00000310645 TIGD1Q96MW7 591 aa17.21■□□□□ 0.34
COL6A2-202ENST00000310645 ZNF446Q9NWS9 450 aa17.21■□□□□ 0.34
COL6A2-202ENST00000310645 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.34
COL6A2-202ENST00000310645 CHGBP05060 677 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 SDF4Q9BRK5 362 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 MON2Q7Z3U7 1717 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
COL6A2-202ENST00000310645 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
COL6A2-202ENST00000310645 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 USP6P35125 1406 aa17.2■□□□□ 0.34
COL6A2-202ENST00000310645 CAVIN2O95810 425 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
COL6A2-202ENST00000310645 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 HIP1O00291 1037 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
COL6A2-202ENST00000310645 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
COL6A2-202ENST00000310645 FSIP1Q8NA03 581 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 POLR3GO15318 223 aaPredicted RBP17.19■□□□□ 0.34
COL6A2-202ENST00000310645 SASH1O94885 1247 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
COL6A2-202ENST00000310645 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 KDRP35968 1356 aa17.19■□□□□ 0.34
COL6A2-202ENST00000310645 BIN1O00499 593 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 TMC6Q7Z403 805 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
COL6A2-202ENST00000310645 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
COL6A2-202ENST00000310645 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
COL6A2-202ENST00000310645 ARHGAP29Q52LW3 1261 aa17.17■□□□□ 0.34
COL6A2-202ENST00000310645 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
COL6A2-202ENST00000310645 NEO1Q92859 1461 aa17.17■□□□□ 0.34
COL6A2-202ENST00000310645 ERBB3P21860 1342 aa17.17■□□□□ 0.34
COL6A2-202ENST00000310645 TEFQ10587 303 aa17.17■□□□□ 0.34
COL6A2-202ENST00000310645 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
COL6A2-202ENST00000310645 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
COL6A2-202ENST00000310645 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-202ENST00000310645 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
COL6A2-202ENST00000310645 ISM2Q6H9L7 571 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 CTAGE5O15320 804 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 CLCN6P51797 869 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 SCRN1Q12765 414 aa17.16■□□□□ 0.34
COL6A2-202ENST00000310645 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 TAF5LO75529 589 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 HOXC9P31274 260 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 SUCLG2Q96I99 432 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 BICC1Q9H694 974 aaKnown RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 ADCY9O60503 1353 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 XPO4Q9C0E2 1151 aaKnown RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 CALCOCO1Q9P1Z2 691 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
COL6A2-202ENST00000310645 FAM208AQ9UK61 1670 aaKnown RBP17.15■□□□□ 0.34
COL6A2-202ENST00000310645 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-202ENST00000310645 SFPQP23246 707 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL6A2-202ENST00000310645 NAT10Q9H0A0 1025 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms