RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LAMB2P55268 1798 aa25.05■■□□□ 1.6
VEGFB-201ENST00000309422 LTBP3Q9NS15 1303 aa25.05■■□□□ 1.6
VEGFB-201ENST00000309422 JARID2Q92833 1246 aaPredicted RBP25.05■■□□□ 1.6
VEGFB-201ENST00000309422 ZC3H4Q9UPT8 1303 aaKnown RBP25.04■■□□□ 1.6
VEGFB-201ENST00000309422 GRM8O00222 908 aa25.04■■□□□ 1.6
VEGFB-201ENST00000309422 FKBP4Q02790 459 aaKnown RBP eCLIP25.04■■□□□ 1.6
VEGFB-201ENST00000309422 CDC5LQ99459 802 aaKnown RBP25.04■■□□□ 1.6
VEGFB-201ENST00000309422 H7C1W4 665 aa25.03■■□□□ 1.6
VEGFB-201ENST00000309422 NFKBIEO00221 500 aa25.03■■□□□ 1.6
VEGFB-201ENST00000309422 BRPF1P55201 1214 aaPredicted RBP25.03■■□□□ 1.6
VEGFB-201ENST00000309422 ATP6V0A2Q9Y487 856 aa25.03■■□□□ 1.6
VEGFB-201ENST00000309422 CACNA1SQ13698 1873 aa25.03■■□□□ 1.6
VEGFB-201ENST00000309422 CCT4P50991 539 aaKnown RBP25.02■■□□□ 1.6
VEGFB-201ENST00000309422 SUPT20HQ8NEM7 779 aa25.02■■□□□ 1.6
VEGFB-201ENST00000309422 NOB1Q9ULX3 412 aaKnown RBP25.02■■□□□ 1.6
VEGFB-201ENST00000309422 DDX60Q8IY21 1712 aaKnown RBP25.02■■□□□ 1.6
VEGFB-201ENST00000309422 SLX4Q8IY92 1834 aa25.01■■□□□ 1.59
VEGFB-201ENST00000309422 C7orf43Q8WVR3 580 aa25.01■■□□□ 1.59
VEGFB-201ENST00000309422 CCDC85AQ96PX6 553 aaPredicted RBP25.01■■□□□ 1.59
VEGFB-201ENST00000309422 ANKRD18AQ8IVF6 992 aa25■■□□□ 1.59
VEGFB-201ENST00000309422 FRAT1Q92837 279 aaPredicted RBP25■■□□□ 1.59
VEGFB-201ENST00000309422 CHMP3Q9Y3E7 222 aa25■■□□□ 1.59
VEGFB-201ENST00000309422 DPP8Q6V1X1 898 aaPredicted RBP24.99■■□□□ 1.59
VEGFB-201ENST00000309422 SP8Q8IXZ3 490 aa24.99■■□□□ 1.59
VEGFB-201ENST00000309422 PSMD1Q99460 953 aa24.99■■□□□ 1.59
VEGFB-201ENST00000309422 PLA2G12BQ9BX93 195 aa24.99■■□□□ 1.59
VEGFB-201ENST00000309422 RPS8P62241 208 aaKnown RBP24.98■■□□□ 1.59
VEGFB-201ENST00000309422 ARHGAP45Q92619 1136 aa24.98■■□□□ 1.59
VEGFB-201ENST00000309422 GPBP1L1Q9HC44 474 aaPredicted RBP24.98■■□□□ 1.59
VEGFB-201ENST00000309422 HDAC5Q9UQL6 1122 aa24.98■■□□□ 1.59
VEGFB-201ENST00000309422 IGHMBP2P38935 993 aaKnown RBP24.97■■□□□ 1.59
VEGFB-201ENST00000309422 ZNF784Q8NCA9 323 aaPredicted RBP24.97■■□□□ 1.59
VEGFB-201ENST00000309422 JDP2Q8WYK2 163 aa24.97■■□□□ 1.59
VEGFB-201ENST00000309422 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
VEGFB-201ENST00000309422 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
VEGFB-201ENST00000309422 MPNDQ8N594 471 aa24.96■■□□□ 1.59
VEGFB-201ENST00000309422 ZNF526Q8TF50 670 aaPredicted RBP24.96■■□□□ 1.59
VEGFB-201ENST00000309422 CELF1Q92879 486 aaKnown RBP24.96■■□□□ 1.59
VEGFB-201ENST00000309422 RTL9Q8NET4 1388 aa24.96■■□□□ 1.59
VEGFB-201ENST00000309422 IARSP41252 1262 aaKnown RBP24.95■■□□□ 1.59
VEGFB-201ENST00000309422 OLFM4Q6UX06 510 aa24.95■■□□□ 1.59
VEGFB-201ENST00000309422 TTLL11Q8NHH1 800 aa24.95■■□□□ 1.59
VEGFB-201ENST00000309422 ZNF277Q9NRM2 450 aaPredicted RBP24.95■■□□□ 1.59
VEGFB-201ENST00000309422 ZKSCAN2Q63HK3 967 aa24.94■■□□□ 1.58
VEGFB-201ENST00000309422 FTSJ3Q8IY81 847 aaKnown RBP24.94■■□□□ 1.58
VEGFB-201ENST00000309422 MPHOSPH8Q99549 860 aa24.94■■□□□ 1.58
VEGFB-201ENST00000309422 GREM2Q9H772 168 aa24.94■■□□□ 1.58
VEGFB-201ENST00000309422 ANKRD18BA2A2Z9 1011 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 IFIT5Q13325 482 aaKnown RBP24.93■■□□□ 1.58
VEGFB-201ENST00000309422 DPY19L2Q6NUT2 758 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 SEC31BQ9NQW1 1179 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 ITGA6P23229 1130 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 CASP7P55210 303 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 CCDC57Q2TAC2 916 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 FAM161AQ3B820 660 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 ATF7IPQ6VMQ6 1270 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 LARGE2Q8N3Y3 721 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 YTHDC1Q96MU7 727 aaKnown RBP24.93■■□□□ 1.58
VEGFB-201ENST00000309422 ANKIB1Q9P2G1 1089 aa24.93■■□□□ 1.58
VEGFB-201ENST00000309422 NSFL1CQ9UNZ2 370 aaKnown RBP24.93■■□□□ 1.58
VEGFB-201ENST00000309422 FER1L6Q2WGJ9 1857 aa24.92■■□□□ 1.58
VEGFB-201ENST00000309422 PPIP5K2O43314 1243 aa24.92■■□□□ 1.58
VEGFB-201ENST00000309422 BCAR3O75815 825 aa24.92■■□□□ 1.58
VEGFB-201ENST00000309422 EYA3Q99504 573 aa24.92■■□□□ 1.58
VEGFB-201ENST00000309422 VPS33BQ9H267 617 aa24.92■■□□□ 1.58
VEGFB-201ENST00000309422 NIM1KQ8IY84 436 aa24.91■■□□□ 1.58
VEGFB-201ENST00000309422 UBTFL1P0CB47 393 aaPredicted RBP24.9■■□□□ 1.58
VEGFB-201ENST00000309422 C6orf229H3BNL8 230 aa24.89■■□□□ 1.57
VEGFB-201ENST00000309422 LMBR1LQ6UX01 489 aa24.89■■□□□ 1.57
VEGFB-201ENST00000309422 UTYO14607 1347 aa24.89■■□□□ 1.57
VEGFB-201ENST00000309422 TIAM2Q8IVF5 1701 aa24.88■■□□□ 1.57
VEGFB-201ENST00000309422 CSF1RP07333 972 aa24.88■■□□□ 1.57
VEGFB-201ENST00000309422 NBPF7P0C2Y1 421 aaPredicted RBP24.88■■□□□ 1.57
VEGFB-201ENST00000309422 MS4A1P11836 297 aa24.88■■□□□ 1.57
VEGFB-201ENST00000309422 TRIM27P14373 513 aa24.88■■□□□ 1.57
VEGFB-201ENST00000309422 EIF6P56537 245 aaKnown RBP24.88■■□□□ 1.57
VEGFB-201ENST00000309422 GGA1Q9UJY5 639 aa24.88■■□□□ 1.57
VEGFB-201ENST00000309422 G3V3G9 751 aa24.87■■□□□ 1.57
VEGFB-201ENST00000309422 DCAF8Q5TAQ9 597 aa24.87■■□□□ 1.57
VEGFB-201ENST00000309422 RTFDC1Q9BY42 306 aaPredicted RBP24.87■■□□□ 1.57
VEGFB-201ENST00000309422 BSDC1Q9NW68 430 aaPredicted RBP24.87■■□□□ 1.57
VEGFB-201ENST00000309422 XDHP47989 1333 aa24.87■■□□□ 1.57
VEGFB-201ENST00000309422 MYH3P11055 1940 aa24.87■■□□□ 1.57
VEGFB-201ENST00000309422 SNED1Q8TER0 1413 aa24.87■■□□□ 1.57
VEGFB-201ENST00000309422 UFL1O94874 794 aa24.86■■□□□ 1.57
VEGFB-201ENST00000309422 C16orf71Q8IYS4 520 aaPredicted RBP24.86■■□□□ 1.57
VEGFB-201ENST00000309422 SUCLG2Q96I99 432 aa24.86■■□□□ 1.57
VEGFB-201ENST00000309422 GLTPD2A6NH11 291 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 GNAI3P08754 354 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 KCNJ4P48050 445 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 FOXO4P98177 505 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 CLUAP1Q96AJ1 413 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 ANKRD2Q9GZV1 360 aa24.85■■□□□ 1.57
VEGFB-201ENST00000309422 PRELPP51888 382 aa24.84■■□□□ 1.57
VEGFB-201ENST00000309422 GPSM2P81274 684 aa24.84■■□□□ 1.57
VEGFB-201ENST00000309422 AOC3Q16853 763 aa24.84■■□□□ 1.57
VEGFB-201ENST00000309422 WASHC4Q2M389 1173 aa24.84■■□□□ 1.57
VEGFB-201ENST00000309422 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.84■■□□□ 1.57
VEGFB-201ENST00000309422 BICC1Q9H694 974 aaKnown RBP24.84■■□□□ 1.57
VEGFB-201ENST00000309422 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms