RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ELF2Q15723 593 aa13.08□□□□□ -0.31
PTPN7-201ENST00000309017 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.31
PTPN7-201ENST00000309017 C11orf57Q6ZUT1 292 aaPredicted RBP13.08□□□□□ -0.31
PTPN7-201ENST00000309017 HOMER1Q86YM7 354 aa13.08□□□□□ -0.31
PTPN7-201ENST00000309017 CEP57L1Q8IYX8 460 aa13.08□□□□□ -0.31
PTPN7-201ENST00000309017 ZNF397Q8NF99 534 aaPredicted RBP13.08□□□□□ -0.31
PTPN7-201ENST00000309017 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.31
PTPN7-201ENST00000309017 NEMFO60524 1076 aa13.08□□□□□ -0.32
PTPN7-201ENST00000309017 CAVIN2O95810 425 aa13.08□□□□□ -0.32
PTPN7-201ENST00000309017 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
PTPN7-201ENST00000309017 Q6ZUG5 572 aa13.08□□□□□ -0.32
PTPN7-201ENST00000309017 KLHDC4Q8TBB5 520 aa13.08□□□□□ -0.32
PTPN7-201ENST00000309017 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
PTPN7-201ENST00000309017 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
PTPN7-201ENST00000309017 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
PTPN7-201ENST00000309017 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-201ENST00000309017 DDX41Q9UJV9 622 aaKnown RBP13.08□□□□□ -0.32
PTPN7-201ENST00000309017 KRT32Q14532 448 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 KDRP35968 1356 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 CCT2P78371 535 aaKnown RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 SYCP1Q15431 976 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTPN7-201ENST00000309017 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
PTPN7-201ENST00000309017 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 TAF3Q5VWG9 929 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-201ENST00000309017 BABAM1Q9NWV8 329 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 CTAGE5O15320 804 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
PTPN7-201ENST00000309017 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
PTPN7-201ENST00000309017 CCDC129Q6ZRS4 1044 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
PTPN7-201ENST00000309017 SLU7O95391 586 aaKnown RBP13.05□□□□□ -0.32
PTPN7-201ENST00000309017 GTF3C6Q969F1 213 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
PTPN7-201ENST00000309017 GRM8O00222 908 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 SNW1Q13573 536 aaKnown RBP13.05□□□□□ -0.32
PTPN7-201ENST00000309017 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-201ENST00000309017 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 C3P01024 1663 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 TPM4P67936 248 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 KSR2Q6VAB6 950 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
PTPN7-201ENST00000309017 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 SASH1O94885 1247 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 KMT5BQ4FZB7 885 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 BIN1O00499 593 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 RESTQ13127 1097 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
PTPN7-201ENST00000309017 MYL6BP14649 208 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 FBXO38Q6PIJ6 1188 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 KCNB2Q92953 911 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN7-201ENST00000309017 CDC25BP30305 580 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 GSDMDP57764 484 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 IQCB1Q15051 598 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
PTPN7-201ENST00000309017 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-201ENST00000309017 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
PTPN7-201ENST00000309017 STK38Q15208 465 aa13.02□□□□□ -0.32
PTPN7-201ENST00000309017 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.32
PTPN7-201ENST00000309017 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.32
PTPN7-201ENST00000309017 USP28Q96RU2 1077 aa13.02□□□□□ -0.32
PTPN7-201ENST00000309017 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 TAF5LO75529 589 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 MNS1Q8NEH6 495 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 ADCY9O60503 1353 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 MTX1Q13505 466 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
PTPN7-201ENST00000309017 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-201ENST00000309017 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms