RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 DZIP1Q86YF9 867 aaKnown RBP21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 ANTXR1Q9H6X2 564 aa21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 PHAXQ9H814 394 aaKnown RBP21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 RIOK3O14730 519 aaKnown RBP21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 CHMLP26374 656 aa21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 PRM3Q9NNZ6 103 aa21.06■□□□□ 0.96
ATP2A2-201ENST00000308664 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 DDB1Q16531 1140 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 MYRIPQ8NFW9 859 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 MKNK2Q9HBH9 465 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 YTHDC2Q9H6S0 1430 aaKnown RBP21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 GADD45BO75293 160 aaPredicted RBP21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 KRT18P05783 430 aaKnown RBP21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 GBP3Q9H0R5 595 aa21.05■□□□□ 0.96
ATP2A2-201ENST00000308664 SLU7O95391 586 aaKnown RBP21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 ITSN2Q9NZM3 1697 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 ATP6V1AP38606 617 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 SOGA3Q5TF21 947 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 CNNM3Q8NE01 707 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 FLT4P35916 1363 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 AOPEPQ8N6M6 819 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 PPP1R9BQ96SB3 815 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 TERF1P54274 439 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 ATP8B2P98198 1209 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 FAM173BQ6P4H8 233 aa21.04■□□□□ 0.96
ATP2A2-201ENST00000308664 HOXC9P31274 260 aa21.03■□□□□ 0.96
ATP2A2-201ENST00000308664 KIAA1328Q86T90 577 aa21.03■□□□□ 0.96
ATP2A2-201ENST00000308664 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
ATP2A2-201ENST00000308664 ARHGEF12Q9NZN5 1544 aa21.03■□□□□ 0.96
ATP2A2-201ENST00000308664 LTKP29376 864 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 HELBQ8NG08 1087 aaPredicted RBP21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 SLC5A1P13866 664 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 RFC4P35249 363 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 CCDC144CPQ8IYA2 1237 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 GRM8O00222 908 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 STIM1Q13586 685 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 G2E3Q7L622 706 aa21.02■□□□□ 0.96
ATP2A2-201ENST00000308664 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.95
ATP2A2-201ENST00000308664 ZNF213O14771 459 aa21.02■□□□□ 0.95
ATP2A2-201ENST00000308664 TEX13AQ9BXU3 409 aaPredicted RBP21.02■□□□□ 0.95
ATP2A2-201ENST00000308664 TRIM35Q9UPQ4 493 aa21.02■□□□□ 0.95
ATP2A2-201ENST00000308664 GOLGA6L10A6NI86 522 aa21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 IBSPP21815 317 aaPredicted RBP21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 CCDC12Q8WUD4 166 aaPredicted RBP21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 BTG4Q9NY30 223 aa21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 ORC3Q9UBD5 711 aaPredicted RBP21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 IL2RBP14784 551 aa21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 NBPF5PQ86XG9 351 aaPredicted RBP21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
ATP2A2-201ENST00000308664 LMOD1P29536 600 aaPredicted RBP21■□□□□ 0.95
ATP2A2-201ENST00000308664 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 CCDC150Q8NCX0 1101 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 MCM6Q14566 821 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 KSR2Q6VAB6 950 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 FEZ1Q99689 392 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 USP16Q9Y5T5 823 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 ZNF397Q8NF99 534 aaPredicted RBP21■□□□□ 0.95
ATP2A2-201ENST00000308664 OGFRQ9NZT2 677 aa21■□□□□ 0.95
ATP2A2-201ENST00000308664 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 CCDC148Q8NFR7 591 aa20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 UBASH3AP57075 661 aa20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 USP8P40818 1118 aa20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 ARFGAP3Q9NP61 516 aa20.99■□□□□ 0.95
ATP2A2-201ENST00000308664 TANGO6Q9C0B7 1094 aa20.98■□□□□ 0.95
ATP2A2-201ENST00000308664 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.956e-11■■□□□ 12
ATP2A2-201ENST00000308664 SIRT1Q96EB6 747 aa20.98■□□□□ 0.95
ATP2A2-201ENST00000308664 CD2BP2O95400 341 aaKnown RBP20.98■□□□□ 0.95
ATP2A2-201ENST00000308664 ODF2Q5BJF6 829 aa20.98■□□□□ 0.95
ATP2A2-201ENST00000308664 NIP7Q9Y221 180 aaKnown RBP eCLIP20.98■□□□□ 0.957e-6■■□□□ 13.6
ATP2A2-201ENST00000308664 IFIT3O14879 490 aaKnown RBP20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 ZNF500O60304 480 aaPredicted RBP20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 SYT10Q6XYQ8 523 aa20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 IP6K1Q92551 441 aa20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 GTF3C6Q969F1 213 aa20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 TMOD2Q9NZR1 351 aa20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 INSRP06213 1382 aa20.97■□□□□ 0.95
ATP2A2-201ENST00000308664 CDC5LQ99459 802 aaKnown RBP20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 ABCC1P33527 1531 aa20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 CT47A1Q5JQC4 288 aaPredicted RBP20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 HMG20BQ9P0W2 317 aa20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 SMARCC1Q92922 1105 aaPredicted RBP20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
ATP2A2-201ENST00000308664 LIG1P18858 919 aa20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 MICU3Q86XE3 530 aa20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 BCL2L12Q9HB09 334 aa20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 TMEM132AQ24JP5 1023 aa20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 LINS1Q8NG48 757 aa20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 MRPS27Q92552 414 aaKnown RBP20.95■□□□□ 0.94
ATP2A2-201ENST00000308664 ZFYVE27Q5T4F4 411 aa20.94■□□□□ 0.94
ATP2A2-201ENST00000308664 KIF20AO95235 890 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms