RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PI4KAP2A4QPH2 592 aa25.53■■□□□ 1.68
PDZRN3-202ENST00000308537 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
PDZRN3-202ENST00000308537 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
PDZRN3-202ENST00000308537 PI4KAP1Q8N8J0 262 aa25.53■■□□□ 1.68
PDZRN3-202ENST00000308537 ADAMTSL1Q8N6G6 1762 aa25.52■■□□□ 1.68
PDZRN3-202ENST00000308537 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
PDZRN3-202ENST00000308537 DDX46Q7L014 1031 aaKnown RBP25.52■■□□□ 1.68
PDZRN3-202ENST00000308537 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
PDZRN3-202ENST00000308537 PCCAP05165 728 aaPredicted RBP25.51■■□□□ 1.67
PDZRN3-202ENST00000308537 POTEIP0CG38 1075 aa25.51■■□□□ 1.67
PDZRN3-202ENST00000308537 POTEJP0CG39 1038 aa25.51■■□□□ 1.67
PDZRN3-202ENST00000308537 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
PDZRN3-202ENST00000308537 SLC4A2P04920 1241 aa25.5■■□□□ 1.67
PDZRN3-202ENST00000308537 SMC1BQ8NDV3 1235 aa25.5■■□□□ 1.67
PDZRN3-202ENST00000308537 APLP1P51693 650 aa25.49■■□□□ 1.67
PDZRN3-202ENST00000308537 DNAJC5GQ8N7S2 189 aa25.49■■□□□ 1.67
PDZRN3-202ENST00000308537 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
PDZRN3-202ENST00000308537 STK31Q9BXU1 1019 aa25.49■■□□□ 1.67
PDZRN3-202ENST00000308537 CWC25Q9NXE8 425 aaPredicted RBP25.49■■□□□ 1.67
PDZRN3-202ENST00000308537 MYH3P11055 1940 aa25.48■■□□□ 1.67
PDZRN3-202ENST00000308537 FLIIQ13045 1269 aa25.47■■□□□ 1.67
PDZRN3-202ENST00000308537 CDHR2Q9BYE9 1310 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 AOC3Q16853 763 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 TMC4Q7Z404 712 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 LARGE2Q8N3Y3 721 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 JDP2Q8WYK2 163 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 VPS33BQ9H267 617 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 TAF1DQ9H5J8 278 aaPredicted RBP25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 SEC31BQ9NQW1 1179 aa25.46■■□□□ 1.67
PDZRN3-202ENST00000308537 NEURL1BA8MQ27 555 aa25.45■■□□□ 1.66
PDZRN3-202ENST00000308537 HTRA3P83110 453 aa25.45■■□□□ 1.66
PDZRN3-202ENST00000308537 CWF19L2Q2TBE0 894 aaKnown RBP25.45■■□□□ 1.66
PDZRN3-202ENST00000308537 GPC2Q8N158 579 aa25.45■■□□□ 1.66
PDZRN3-202ENST00000308537 MPNDQ8N594 471 aa25.45■■□□□ 1.66
PDZRN3-202ENST00000308537 PPIP5K2O43314 1243 aa25.44■■□□□ 1.66
PDZRN3-202ENST00000308537 DPP8Q6V1X1 898 aaPredicted RBP25.44■■□□□ 1.66
PDZRN3-202ENST00000308537 PDE8AO60658 829 aa25.43■■□□□ 1.66
PDZRN3-202ENST00000308537 KIAA2012Q0VF49 1180 aa25.43■■□□□ 1.66
PDZRN3-202ENST00000308537 IQCA1LA6NCM1 817 aa25.42■■□□□ 1.66
PDZRN3-202ENST00000308537 H7C1W4 665 aa25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 SCNN1DP51172 638 aa25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 CASP7P55210 303 aa25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 SUPT20HQ8NEM7 779 aa25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 MYH16Q9H6N6 1097 aa25.41■■□□□ 1.66
PDZRN3-202ENST00000308537 DNAAF4Q8WXU2 420 aa25.4■■□□□ 1.66
PDZRN3-202ENST00000308537 HACL1Q9UJ83 578 aa25.4■■□□□ 1.66
PDZRN3-202ENST00000308537 PCNTO95613 3336 aa25.4■■□□□ 1.66
PDZRN3-202ENST00000308537 EIF6P56537 245 aaKnown RBP25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 GPSM2P81274 684 aa25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 CHADLQ6NUI6 762 aa25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 NIM1KQ8IY84 436 aa25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 TMX4Q9H1E5 349 aaPredicted RBP25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 POLLQ9UGP5 575 aa25.39■■□□□ 1.66
PDZRN3-202ENST00000308537 YDJCA8MPS7 323 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 EPHX2P34913 555 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 CXCL9Q07325 125 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 NEXNQ0ZGT2 675 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 FKBP5Q13451 457 aaPredicted RBP25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 GCKRQ14397 625 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 ZNRF3Q9ULT6 936 aa25.38■■□□□ 1.65
PDZRN3-202ENST00000308537 SCN9AQ15858 1988 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 RTL9Q8NET4 1388 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 HSP90B1P14625 803 aaKnown RBP25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 CTSWP56202 376 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 CCDC152Q4G0S7 254 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 LDHDQ86WU2 507 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 TTLL11Q8NHH1 800 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 CCDC85AQ96PX6 553 aaPredicted RBP25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 GJA3Q9Y6H8 435 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 SPEF2Q9C093 1822 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 PASKQ96RG2 1323 aa25.37■■□□□ 1.65
PDZRN3-202ENST00000308537 CCER2I3L3R5 266 aa25.36■■□□□ 1.65
PDZRN3-202ENST00000308537 LINS1Q8NG48 757 aa25.36■■□□□ 1.65
PDZRN3-202ENST00000308537 PLA2G12BQ9BX93 195 aa25.36■■□□□ 1.65
PDZRN3-202ENST00000308537 PODXL2Q9NZ53 605 aa25.36■■□□□ 1.65
PDZRN3-202ENST00000308537 NSFL1CQ9UNZ2 370 aaKnown RBP25.36■■□□□ 1.65
PDZRN3-202ENST00000308537 F6X3S4 739 aa25.35■■□□□ 1.65
PDZRN3-202ENST00000308537 EPS15P42566 896 aa25.35■■□□□ 1.65
PDZRN3-202ENST00000308537 UBE3BQ7Z3V4 1068 aa25.35■■□□□ 1.65
PDZRN3-202ENST00000308537 ITGBL1O95965 494 aaPredicted RBP25.34■■□□□ 1.65
PDZRN3-202ENST00000308537 BEND3Q5T5X7 828 aa25.34■■□□□ 1.65
PDZRN3-202ENST00000308537 TBC1D16Q8TBP0 767 aa25.34■■□□□ 1.65
PDZRN3-202ENST00000308537 GREM2Q9H772 168 aa25.34■■□□□ 1.65
PDZRN3-202ENST00000308537 GPR101Q96P66 508 aaPredicted RBP25.33■■□□□ 1.65
PDZRN3-202ENST00000308537 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
PDZRN3-202ENST00000308537 KLRG1Q96E93 195 aa25.32■■□□□ 1.64
PDZRN3-202ENST00000308537 WASHC4Q2M389 1173 aa25.31■■□□□ 1.64
PDZRN3-202ENST00000308537 EAPPQ56P03 285 aaPredicted RBP25.31■■□□□ 1.64
PDZRN3-202ENST00000308537 PNMA8AQ86V59 439 aaPredicted RBP25.31■■□□□ 1.64
PDZRN3-202ENST00000308537 GPRC5DQ9NZD1 345 aa25.31■■□□□ 1.64
PDZRN3-202ENST00000308537 PSME4Q14997 1843 aa25.3■■□□□ 1.64
PDZRN3-202ENST00000308537 CSF1RP07333 972 aa25.3■■□□□ 1.64
PDZRN3-202ENST00000308537 TRMT2AQ8IZ69 625 aaKnown RBP25.3■■□□□ 1.64
PDZRN3-202ENST00000308537 CDCA7LQ96GN5 454 aa25.3■■□□□ 1.64
PDZRN3-202ENST00000308537 WTIPA6NIX2 430 aaPredicted RBP25.29■■□□□ 1.64
PDZRN3-202ENST00000308537 E9PSI1 815 aa25.29■■□□□ 1.64
PDZRN3-202ENST00000308537 RAD17O75943 681 aa25.29■■□□□ 1.64
PDZRN3-202ENST00000308537 CIAPIN1Q6FI81 312 aa25.29■■□□□ 1.64
PDZRN3-202ENST00000308537 DBNDD1Q9H9R9 158 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms