RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ARID5BQ14865 1188 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 BRF1Q92994 677 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 PRIMPOLQ96LW4 560 aa19.67■□□□□ 0.74
SSH3-201ENST00000308127 GUCY1B3Q02153 619 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 DDX46Q7L014 1031 aaKnown RBP19.66■□□□□ 0.74
SSH3-201ENST00000308127 CCDC94Q9BW85 323 aaPredicted RBP19.66■□□□□ 0.74
SSH3-201ENST00000308127 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 ERC1Q8IUD2 1116 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 COL15A1P39059 1388 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 ATP5J2-PTCD1G3V325 749 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
SSH3-201ENST00000308127 FGD1P98174 961 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 PRDM4Q9UKN5 801 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 AXIN2Q9Y2T1 843 aa19.66■□□□□ 0.74
SSH3-201ENST00000308127 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
SSH3-201ENST00000308127 CHST3Q7LGC8 479 aa19.65■□□□□ 0.74
SSH3-201ENST00000308127 U2AF2P26368 475 aaKnown RBP eCLIP19.65■□□□□ 0.74
SSH3-201ENST00000308127 PSMA5P28066 241 aa19.65■□□□□ 0.74
SSH3-201ENST00000308127 Q6ZUG5 572 aa19.65■□□□□ 0.74
SSH3-201ENST00000308127 ZNF592Q92610 1267 aa19.65■□□□□ 0.74
SSH3-201ENST00000308127 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
SSH3-201ENST00000308127 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 LINS1Q8NG48 757 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 XAGE3Q8WTP9 111 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 ORAI2Q96SN7 254 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 NPHP4O75161 1426 aaPredicted RBP19.64■□□□□ 0.73
SSH3-201ENST00000308127 H3BQV1 296 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 TFCP2Q12800 502 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 KCNB2Q92953 911 aa19.64■□□□□ 0.73
SSH3-201ENST00000308127 DBNLQ9UJU6 430 aaKnown RBP19.64■□□□□ 0.73
SSH3-201ENST00000308127 TAF5LO75529 589 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 CCT2P78371 535 aaKnown RBP19.63■□□□□ 0.73
SSH3-201ENST00000308127 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 ZNF165P49910 485 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
SSH3-201ENST00000308127 CCDC144BQ3MJ40 725 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
SSH3-201ENST00000308127 HOXB7P09629 217 aa19.62■□□□□ 0.73
SSH3-201ENST00000308127 CHAF1AQ13111 956 aaPredicted RBP19.62■□□□□ 0.73
SSH3-201ENST00000308127 DBNDD2Q9BQY9 259 aa19.62■□□□□ 0.73
SSH3-201ENST00000308127 NCOA5Q9HCD5 579 aaKnown RBP19.62■□□□□ 0.73
SSH3-201ENST00000308127 PDIA6Q15084 440 aa19.62■□□□□ 0.73
SSH3-201ENST00000308127 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
SSH3-201ENST00000308127 GOLGA6L6A8MZA4 724 aa19.61■□□□□ 0.73
SSH3-201ENST00000308127 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
SSH3-201ENST00000308127 PDCP20941 246 aa19.61■□□□□ 0.73
SSH3-201ENST00000308127 PDCL2Q8N4E4 241 aa19.61■□□□□ 0.73
SSH3-201ENST00000308127 GCP02774 474 aa19.6■□□□□ 0.73
SSH3-201ENST00000308127 C11orf57Q6ZUT1 292 aaPredicted RBP19.6■□□□□ 0.73
SSH3-201ENST00000308127 MTERF4Q7Z6M4 381 aaKnown RBP19.6■□□□□ 0.73
SSH3-201ENST00000308127 NFATC2IPQ8NCF5 419 aa19.6■□□□□ 0.73
SSH3-201ENST00000308127 MARF1Q9Y4F3 1742 aaKnown RBP19.6■□□□□ 0.73
SSH3-201ENST00000308127 CYP21A2P08686 494 aa19.6■□□□□ 0.73
SSH3-201ENST00000308127 RAB11FIP4Q86YS3 637 aa19.6■□□□□ 0.73
SSH3-201ENST00000308127 CACTINQ8WUQ7 758 aaKnown RBP19.6■□□□□ 0.73
SSH3-201ENST00000308127 NEK1Q96PY6 1258 aa19.6■□□□□ 0.73
SSH3-201ENST00000308127 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.6■□□□□ 0.73
SSH3-201ENST00000308127 V9GYY5 206 aaPredicted RBP19.6■□□□□ 0.73
SSH3-201ENST00000308127 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 ZNF75DP51815 510 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 SCAND2PQ9GZW5 306 aaPredicted RBP19.59■□□□□ 0.73
SSH3-201ENST00000308127 LTN1O94822 1766 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 APOBRQ0VD83 1088 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 CLSTN2Q9H4D0 955 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 CLIP2Q9UDT6 1046 aa19.59■□□□□ 0.73
SSH3-201ENST00000308127 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.73
SSH3-201ENST00000308127 SCRN1Q12765 414 aa19.58■□□□□ 0.73
SSH3-201ENST00000308127 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.73
SSH3-201ENST00000308127 STOX1Q6ZVD7 989 aa19.58■□□□□ 0.73
SSH3-201ENST00000308127 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.73
SSH3-201ENST00000308127 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.73
SSH3-201ENST00000308127 MED23Q9ULK4 1368 aa19.58■□□□□ 0.73
SSH3-201ENST00000308127 GTF2F1P35269 517 aaKnown RBP eCLIP19.58■□□□□ 0.72
SSH3-201ENST00000308127 GTF3C6Q969F1 213 aa19.58■□□□□ 0.72
SSH3-201ENST00000308127 NEUROD6Q96NK8 337 aa19.58■□□□□ 0.72
SSH3-201ENST00000308127 USP27XA6NNY8 438 aa19.58■□□□□ 0.72
SSH3-201ENST00000308127 GCKRQ14397 625 aa19.58■□□□□ 0.72
SSH3-201ENST00000308127 FILIP1Q7Z7B0 1213 aa19.58■□□□□ 0.72
SSH3-201ENST00000308127 SYTL4Q96C24 671 aaPredicted RBP19.58■□□□□ 0.72
SSH3-201ENST00000308127 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
SSH3-201ENST00000308127 HIP1O00291 1037 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 RESTQ13127 1097 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 TNNT1P13805 278 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 NEXNQ0ZGT2 675 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 ANKRD1Q15327 319 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 OTUD7BQ6GQQ9 843 aa19.57■□□□□ 0.72
SSH3-201ENST00000308127 TRMT1Q9NXH9 659 aaKnown RBP19.57■□□□□ 0.72
SSH3-201ENST00000308127 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
SSH3-201ENST00000308127 ELP1O95163 1332 aa19.56■□□□□ 0.72
SSH3-201ENST00000308127 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
SSH3-201ENST00000308127 TNNI3KQ59H18 835 aa19.56■□□□□ 0.72
SSH3-201ENST00000308127 ZNF496Q96IT1 587 aaPredicted RBP19.56■□□□□ 0.72
SSH3-201ENST00000308127 GPHNQ9NQX3 736 aaPredicted RBP19.56■□□□□ 0.72
SSH3-201ENST00000308127 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
SSH3-201ENST00000308127 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
SSH3-201ENST00000308127 ZNF609O15014 1411 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms