RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 COL4A1P02462 1669 aa26.61■■□□□ 1.85
RER1-201ENST00000306256 ELL2O00472 640 aaPredicted RBP26.61■■□□□ 1.85
RER1-201ENST00000306256 RTL5Q5HYW3 569 aaPredicted RBP26.61■■□□□ 1.85
RER1-201ENST00000306256 CNTROBQ8N137 903 aa26.61■■□□□ 1.85
RER1-201ENST00000306256 RTFDC1Q9BY42 306 aaPredicted RBP26.61■■□□□ 1.85
RER1-201ENST00000306256 CNTNAP1P78357 1384 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 DUOX1Q9NRD9 1551 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 TMEM88BA6NKF7 163 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 GNAI1P63096 354 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 MPNDQ8N594 471 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 SUPT20HQ8NEM7 779 aa26.6■■□□□ 1.85
RER1-201ENST00000306256 TRPM7Q96QT4 1865 aa26.58■■□□□ 1.85
RER1-201ENST00000306256 VPS33BQ9H267 617 aa26.58■■□□□ 1.85
RER1-201ENST00000306256 PHAXQ9H814 394 aaKnown RBP26.58■■□□□ 1.85
RER1-201ENST00000306256 ZNRF3Q9ULT6 936 aa26.58■■□□□ 1.85
RER1-201ENST00000306256 CALD1Q05682 793 aaKnown RBP26.57■■□□□ 1.84
RER1-201ENST00000306256 CCDC184Q52MB2 194 aa26.57■■□□□ 1.84
RER1-201ENST00000306256 CXCL9Q07325 125 aa26.56■■□□□ 1.84
RER1-201ENST00000306256 RIC3Q7Z5B4 369 aa26.56■■□□□ 1.84
RER1-201ENST00000306256 C8orf58Q8NAV2 365 aa26.56■■□□□ 1.84
RER1-201ENST00000306256 GOLGA2Q08379 1002 aa26.55■■□□□ 1.84
RER1-201ENST00000306256 KIAA2012Q0VF49 1180 aa26.55■■□□□ 1.84
RER1-201ENST00000306256 CELF1Q92879 486 aaKnown RBP26.55■■□□□ 1.84
RER1-201ENST00000306256 SF3B3Q15393 1217 aaKnown RBP26.54■■□□□ 1.84
RER1-201ENST00000306256 GPRC5DQ9NZD1 345 aa26.54■■□□□ 1.84
RER1-201ENST00000306256 IRS4O14654 1257 aaPredicted RBP26.53■■□□□ 1.84
RER1-201ENST00000306256 VEGFBP49765 207 aa26.53■■□□□ 1.84
RER1-201ENST00000306256 FMR1Q06787 632 aaKnown RBP eCLIP26.53■■□□□ 1.84
RER1-201ENST00000306256 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
RER1-201ENST00000306256 TMC4Q7Z404 712 aa26.53■■□□□ 1.84
RER1-201ENST00000306256 RAD17O75943 681 aa26.52■■□□□ 1.84
RER1-201ENST00000306256 GMPSP49915 693 aaPredicted RBP26.52■■□□□ 1.84
RER1-201ENST00000306256 USP50Q70EL3 339 aaPredicted RBP26.52■■□□□ 1.84
RER1-201ENST00000306256 MYD88Q99836 296 aa26.52■■□□□ 1.84
RER1-201ENST00000306256 CIAPIN1Q6FI81 312 aa26.51■■□□□ 1.83
RER1-201ENST00000306256 YDJCA8MPS7 323 aa26.5■■□□□ 1.83
RER1-201ENST00000306256 TNS4Q8IZW8 715 aa26.5■■□□□ 1.83
RER1-201ENST00000306256 TSPYL6Q8N831 410 aa26.5■■□□□ 1.83
RER1-201ENST00000306256 ADARB2Q9NS39 739 aaKnown RBP26.5■■□□□ 1.83
RER1-201ENST00000306256 ZBTB38Q8NAP3 1195 aaPredicted RBP26.49■■□□□ 1.83
RER1-201ENST00000306256 ABT1Q9ULW3 272 aaKnown RBP26.49■■□□□ 1.83
RER1-201ENST00000306256 NSFL1CQ9UNZ2 370 aaKnown RBP26.49■■□□□ 1.83
RER1-201ENST00000306256 TRAF5O00463 557 aa26.48■■□□□ 1.83
RER1-201ENST00000306256 JARID2Q92833 1246 aaPredicted RBP26.48■■□□□ 1.83
RER1-201ENST00000306256 TSR2Q969E8 191 aaKnown RBP26.48■■□□□ 1.83
RER1-201ENST00000306256 BCL2L13Q9BXK5 485 aa26.48■■□□□ 1.83
RER1-201ENST00000306256 RASSF10A6NK89 507 aa26.47■■□□□ 1.83
RER1-201ENST00000306256 GPSM2P81274 684 aa26.47■■□□□ 1.83
RER1-201ENST00000306256 CCDC30Q5VVM6 783 aa26.47■■□□□ 1.83
RER1-201ENST00000306256 MYH3P11055 1940 aa26.47■■□□□ 1.83
RER1-201ENST00000306256 FOXN1O15353 648 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 TNIP1Q15025 636 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 DEFB115Q30KQ5 88 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 SEC31BQ9NQW1 1179 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 POLLQ9UGP5 575 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 SCN9AQ15858 1988 aa26.46■■□□□ 1.83
RER1-201ENST00000306256 SHTN1A0MZ66 631 aa26.45■■□□□ 1.82
RER1-201ENST00000306256 C6orf229H3BNL8 230 aa26.45■■□□□ 1.82
RER1-201ENST00000306256 RIMBP2O15034 1052 aa26.45■■□□□ 1.82
RER1-201ENST00000306256 RPS8P62241 208 aaKnown RBP26.45■■□□□ 1.82
RER1-201ENST00000306256 WASHC4Q2M389 1173 aa26.45■■□□□ 1.82
RER1-201ENST00000306256 GPR101Q96P66 508 aaPredicted RBP26.45■■□□□ 1.82
RER1-201ENST00000306256 DBNDD1Q9H9R9 158 aa26.45■■□□□ 1.82
RER1-201ENST00000306256 POLR2AP24928 1970 aaKnown RBP26.45■■□□□ 1.82
RER1-201ENST00000306256 SPEF2Q9C093 1822 aa26.44■■□□□ 1.82
RER1-201ENST00000306256 CAPN15O75808 1086 aa26.44■■□□□ 1.82
RER1-201ENST00000306256 CCDC191Q8NCU4 936 aa26.44■■□□□ 1.82
RER1-201ENST00000306256 METTL22Q9BUU2 404 aaPredicted RBP26.44■■□□□ 1.82
RER1-201ENST00000306256 CWC25Q9NXE8 425 aaPredicted RBP26.44■■□□□ 1.82
RER1-201ENST00000306256 CDHR2Q9BYE9 1310 aa26.43■■□□□ 1.82
RER1-201ENST00000306256 DDX58O95786 925 aaKnown RBP26.43■■□□□ 1.82
RER1-201ENST00000306256 PCCAP05165 728 aaPredicted RBP26.43■■□□□ 1.82
RER1-201ENST00000306256 TRPM4Q8TD43 1214 aa26.43■■□□□ 1.82
RER1-201ENST00000306256 CCDC85AQ96PX6 553 aaPredicted RBP26.43■■□□□ 1.82
RER1-201ENST00000306256 MAP3K2Q9Y2U5 619 aa26.43■■□□□ 1.82
RER1-201ENST00000306256 ZBTB12Q9Y330 459 aaPredicted RBP26.42■■□□□ 1.82
RER1-201ENST00000306256 PSMD14O00487 310 aa26.41■■□□□ 1.82
RER1-201ENST00000306256 HIRAP54198 1017 aaPredicted RBP26.41■■□□□ 1.82
RER1-201ENST00000306256 CST9Q5W186 159 aa26.41■■□□□ 1.82
RER1-201ENST00000306256 WWC1Q8IX03 1113 aa26.41■■□□□ 1.82
RER1-201ENST00000306256 GLIS2Q9BZE0 524 aaPredicted RBP26.41■■□□□ 1.82
RER1-201ENST00000306256 CNOT7Q9UIV1 285 aaKnown RBP26.41■■□□□ 1.82
RER1-201ENST00000306256 WDR33Q9C0J8 1336 aaKnown RBP26.4■■□□□ 1.82
RER1-201ENST00000306256 PDE8AO60658 829 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 HSP90B1P14625 803 aaKnown RBP26.4■■□□□ 1.82
RER1-201ENST00000306256 DOK7Q18PE1 504 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 CCDC27Q2M243 656 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 PAXIP1Q6ZW49 1069 aaPredicted RBP26.4■■□□□ 1.82
RER1-201ENST00000306256 MICALL2Q8IY33 904 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 TBC1D16Q8TBP0 767 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 AIDAQ96BJ3 306 aa26.4■■□□□ 1.82
RER1-201ENST00000306256 CACNA1FO60840 1977 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 ECE2O60344 883 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 CCDC152Q4G0S7 254 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 EYA3Q99504 573 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 CHMP4AQ9BY43 222 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 KCNQ5Q9NR82 932 aa26.39■■□□□ 1.82
RER1-201ENST00000306256 THSD7BQ9C0I4 1608 aa26.39■■□□□ 1.81
RER1-201ENST00000306256 RTL9Q8NET4 1388 aa26.38■■□□□ 1.81
RER1-201ENST00000306256 PI4KAP2A4QPH2 592 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms