RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
CTTN-201ENST00000301843 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
CTTN-201ENST00000301843 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
CTTN-201ENST00000301843 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
CTTN-201ENST00000301843 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
CTTN-201ENST00000301843 CHST3Q7LGC8 479 aa16.07■□□□□ 0.16
CTTN-201ENST00000301843 ZNF592Q92610 1267 aa16.07■□□□□ 0.16
CTTN-201ENST00000301843 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
CTTN-201ENST00000301843 MAP7D2Q96T17 732 aa16.07■□□□□ 0.16
CTTN-201ENST00000301843 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 MYD88Q99836 296 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 PXDNQ92626 1479 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 FGD1P98174 961 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 PHRF1Q9P1Y6 1649 aaKnown RBP16.06■□□□□ 0.16
CTTN-201ENST00000301843 HOXB7P09629 217 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 U2AF2P26368 475 aaKnown RBP eCLIP16.06■□□□□ 0.169e-12■□□□□ 10.9
CTTN-201ENST00000301843 FAM200AQ8TCP9 573 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
CTTN-201ENST00000301843 BRF1Q92994 677 aa16.06■□□□□ 0.16
CTTN-201ENST00000301843 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
CTTN-201ENST00000301843 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
CTTN-201ENST00000301843 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
CTTN-201ENST00000301843 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
CTTN-201ENST00000301843 AXIN2Q9Y2T1 843 aa16.05■□□□□ 0.16
CTTN-201ENST00000301843 LMO7Q8WWI1 1683 aa16.05■□□□□ 0.16
CTTN-201ENST00000301843 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
CTTN-201ENST00000301843 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
CTTN-201ENST00000301843 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 PLEKHO1Q53GL0 409 aaPredicted RBP16.04■□□□□ 0.16
CTTN-201ENST00000301843 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 COL15A1P39059 1388 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 Q6ZUG5 572 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 PRIMPOLQ96LW4 560 aa16.04■□□□□ 0.16
CTTN-201ENST00000301843 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
CTTN-201ENST00000301843 USP42Q9H9J4 1324 aaKnown RBP16.03■□□□□ 0.16
CTTN-201ENST00000301843 H3BQV1 296 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 TFCP2Q12800 502 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 RAB11FIP4Q86YS3 637 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
CTTN-201ENST00000301843 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
CTTN-201ENST00000301843 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.165e-6■■□□□ 13.6
CTTN-201ENST00000301843 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
CTTN-201ENST00000301843 ZNF165P49910 485 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 MTX1Q13505 466 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 SYTL4Q96C24 671 aaPredicted RBP16.02■□□□□ 0.16
CTTN-201ENST00000301843 DBNLQ9UJU6 430 aaKnown RBP16.02■□□□□ 0.16
CTTN-201ENST00000301843 PSMA5P28066 241 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
CTTN-201ENST00000301843 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 LINS1Q8NG48 757 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 DBNDD2Q9BQY9 259 aa16.02■□□□□ 0.16
CTTN-201ENST00000301843 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.15
CTTN-201ENST00000301843 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.15
CTTN-201ENST00000301843 TAF5LO75529 589 aa16.02■□□□□ 0.15
CTTN-201ENST00000301843 UBE3BQ7Z3V4 1068 aa16.02■□□□□ 0.15
CTTN-201ENST00000301843 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.15
CTTN-201ENST00000301843 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
CTTN-201ENST00000301843 RNF20Q5VTR2 975 aa16.01■□□□□ 0.15
CTTN-201ENST00000301843 NFATC2IPQ8NCF5 419 aa16.01■□□□□ 0.15
CTTN-201ENST00000301843 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
CTTN-201ENST00000301843 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
CTTN-201ENST00000301843 ALDH1L1O75891 902 aa16■□□□□ 0.15
CTTN-201ENST00000301843 PDIA6Q15084 440 aa16■□□□□ 0.15
CTTN-201ENST00000301843 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
CTTN-201ENST00000301843 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
CTTN-201ENST00000301843 NCAPD2Q15021 1401 aa16■□□□□ 0.15
CTTN-201ENST00000301843 GCP02774 474 aa16■□□□□ 0.15
CTTN-201ENST00000301843 CYP21A2P08686 494 aa16■□□□□ 0.15
CTTN-201ENST00000301843 APOBRQ0VD83 1088 aa16■□□□□ 0.15
CTTN-201ENST00000301843 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
CTTN-201ENST00000301843 FILIP1Q7Z7B0 1213 aa16■□□□□ 0.15
CTTN-201ENST00000301843 ARHGEF25Q86VW2 580 aa16■□□□□ 0.15
CTTN-201ENST00000301843 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
CTTN-201ENST00000301843 USP27XA6NNY8 438 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 NPHP1O15259 732 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 CLIP2Q9UDT6 1046 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 SLIT3O75094 1523 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 STOX1Q6ZVD7 989 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 KCNB2Q92953 911 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 NEK1Q96PY6 1258 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 ZNF75DP51815 510 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 SCRN1Q12765 414 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
CTTN-201ENST00000301843 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
CTTN-201ENST00000301843 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
CTTN-201ENST00000301843 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
CTTN-201ENST00000301843 PDCP20941 246 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms