RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 APBB1O00213 710 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 TRAF5O00463 557 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 HSPA6P17066 643 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 MKRN3Q13064 507 aaKnown RBP7.17□□□□□ -1.26
PATL1-201ENST00000300146 KSR2Q6VAB6 950 aa7.17□□□□□ -1.26
PATL1-201ENST00000300146 FKBP4Q02790 459 aaKnown RBP eCLIP7.16□□□□□ -1.26
PATL1-201ENST00000300146 TTLL12Q14166 644 aaPredicted RBP7.16□□□□□ -1.26
PATL1-201ENST00000300146 VAMP4O75379 141 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 CHAF1AQ13111 956 aaPredicted RBP7.16□□□□□ -1.26
PATL1-201ENST00000300146 CCDC152Q4G0S7 254 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 LMBR1LQ6UX01 489 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 MRC1P22897 1456 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 EPHX2P34913 555 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 GPSM2P81274 684 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 CXCL9Q07325 125 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 METTL22Q9BUU2 404 aaPredicted RBP7.16□□□□□ -1.26
PATL1-201ENST00000300146 PKD1L3Q7Z443 1732 aa7.16□□□□□ -1.26
PATL1-201ENST00000300146 IGKV5-2P06315 115 aa7.15□□□□□ -1.26
PATL1-201ENST00000300146 IGHMBP2P38935 993 aaKnown RBP7.15□□□□□ -1.26
PATL1-201ENST00000300146 GMPSP49915 693 aaPredicted RBP7.15□□□□□ -1.26
PATL1-201ENST00000300146 HACL1Q9UJ83 578 aa7.15□□□□□ -1.26
PATL1-201ENST00000300146 GRAPQ13588 217 aa7.15□□□□□ -1.26
PATL1-201ENST00000300146 GRAPLQ8TC17 118 aaPredicted RBP7.15□□□□□ -1.26
PATL1-201ENST00000300146 CASZ1Q86V15 1759 aa7.15□□□□□ -1.27
PATL1-201ENST00000300146 SOGA3Q5TF21 947 aa7.15□□□□□ -1.27
PATL1-201ENST00000300146 VPS37DQ86XT2 251 aa7.15□□□□□ -1.27
PATL1-201ENST00000300146 PAPPAQ13219 1627 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 ITGA6P23229 1130 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 CIAPIN1Q6FI81 312 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 KIAA0825Q8IV33 1275 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 GLIS2Q9BZE0 524 aaPredicted RBP7.14□□□□□ -1.27
PATL1-201ENST00000300146 GGA1Q9UJY5 639 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 PDE8AO60658 829 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 BBOX1O75936 387 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 ZNF853P0CG23 659 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 CCDC57Q2TAC2 916 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 LDHAL6AQ6ZMR3 332 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 CNTROBQ8N137 903 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 ZBTB38Q8NAP3 1195 aaPredicted RBP7.14□□□□□ -1.27
PATL1-201ENST00000300146 POLLQ9UGP5 575 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 ATP6V0A2Q9Y487 856 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 LY75O60449 1722 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 UBR3Q6ZT12 1888 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 NEURL1BA8MQ27 555 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 SMC1BQ8NDV3 1235 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 CNOT7Q9UIV1 285 aaKnown RBP7.14□□□□□ -1.27
PATL1-201ENST00000300146 TNNQ9UQP3 1299 aa7.14□□□□□ -1.27
PATL1-201ENST00000300146 H7C1D1 291 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 IFIT5Q13325 482 aaKnown RBP7.13□□□□□ -1.27
PATL1-201ENST00000300146 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 ISCA1Q9BUE6 129 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 TAF1DQ9H5J8 278 aaPredicted RBP7.13□□□□□ -1.27
PATL1-201ENST00000300146 TUBGCP6Q96RT7 1819 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 PSMD14O00487 310 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 CCDC191Q8NCU4 936 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 CDC5LQ99459 802 aaKnown RBP7.13□□□□□ -1.27
PATL1-201ENST00000300146 IQCA1LA6NCM1 817 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 BCAR3O75815 825 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 NBPF7P0C2Y1 421 aaPredicted RBP7.13□□□□□ -1.27
PATL1-201ENST00000300146 KLRK1P26718 216 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 GTF2IP78347 998 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 GCKRQ14397 625 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 FZD1Q9UP38 647 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 ERBB4Q15303 1308 aa7.13□□□□□ -1.27
PATL1-201ENST00000300146 EGFRP00533 1210 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 CRAMP1Q96RY5 1269 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 NOB1Q9ULX3 412 aaKnown RBP7.12□□□□□ -1.27
PATL1-201ENST00000300146 ECE2O60344 883 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 SCNN1DP51172 638 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 CTSWP56202 376 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 EPHA10Q5JZY3 1008 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 TXNRD3Q86VQ6 643 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 PUS3Q9BZE2 481 aaKnown RBP7.12□□□□□ -1.27
PATL1-201ENST00000300146 C1orf115Q9H7X2 142 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 VEZTQ9HBM0 779 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 ZNRF3Q9ULT6 936 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 PDZRN3Q9UPQ7 1066 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 ANKRD18BA2A2Z9 1011 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 POTECB2RU33 542 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 CELF2O95319 508 aaKnown RBP7.12□□□□□ -1.27
PATL1-201ENST00000300146 WDR63Q8IWG1 891 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 TTLL11Q8NHH1 800 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 SCN11AQ9UI33 1791 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 TAF1LQ8IZX4 1826 aa7.12□□□□□ -1.27
PATL1-201ENST00000300146 CHADLQ6NUI6 762 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 SP8Q8IXZ3 490 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 TBC1D16Q8TBP0 767 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 TRPM4Q8TD43 1214 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 BABAM1Q9NWV8 329 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 ASTN2O75129 1339 aaPredicted RBP7.11□□□□□ -1.27
PATL1-201ENST00000300146 SASH1O94885 1247 aa7.11□□□□□ -1.27
PATL1-201ENST00000300146 PCCAP05165 728 aaPredicted RBP7.11□□□□□ -1.27
PATL1-201ENST00000300146 OS9Q13438 667 aaPredicted RBP7.11□□□□□ -1.27
PATL1-201ENST00000300146 CHMP4AQ9BY43 222 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms